| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3029 |
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| Symbol | |
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| ID | 4690192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3200241 |
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| End bp | 3201230 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836042 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_983249 |
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| Protein GI | 121605920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.37236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATC CGCGCGAAGT TCTTTTGGGC GCCCAGGCCG CCACGGCTTT TTTGCCGGTG
TGCGACCATT ACAGCGGCGT GGAAGCGCGG ATGCGTAAAA GTCTGCAATT GCAGGCTGAA
ATGATTGAAG AGTTCGGCGC CTGCGTGTTT GACGTGACGC TGGACTGCGA AGACGGCGCG
CCGGTCGGCG GTGAAGCCGA CCATGCCGCC ATGGTGGTCG AACTAGCCGC ATTGGCCAGT
GACAAAGCCC GCGTCGCCGT TCGCGTGCAT GCGGTCGATC ACCCGGCATT CGAGTCCGAC
ATGGCCATCA TCGCCGGAAA GCTTGCGCGC CAGCTGTCCC ACATCATGAT TCCCAAGGTC
GATTCCATCG AGGACGTGAT CCGGGCCGAG CAGGCTCTGC TGGCCGCATC CGCCGGGAAT
TTGCCCCTGC ATGTGCTGAT CGAATCCCCG CTTGCTGTTC GCAACGCCTT TGAAATCGCC
GCGCATCCCC GCGTCCAGTC GCTCAGTTTT GGCCTGATGG ACTTTGTCTC AAGTCATGGC
GGCGCCATTC CCGCCGATGG CATGAGCAGC CAGGGCCAGT TCACCCATCC GCTGGTGGTG
CGCGCCAAGC TTGAAATTGC CTCTGCCTGC CACGCTTATG GCAAAGTGCC TTCGCATTGC
GTGGTGACGG AATTCAATGA CAGCGTTGCC ATGATCCTTG CCGCGCGCCG TGCGTCGCGT
GAACTCGGTT ACACCCGCAT GTGGAGCATT CACCCGAATC AGATACGCTG CATCCTGGAG
GCTTTTGCCC CGAGCGAGTC TGAAATTGAA GATGCTACAA GAATAATAGC TGCTGGCGCT
CGTGCTGATT GGGCGCCCAT CAGTTTTGAC GGTAAATTGC ATGACCGCGC GAGTTATCGC
TACTTCTGGC AGGTGCTTGA AAGAGCGCAC CAGACGGGCA GCCTGCTTCC GATTGACGCC
CAAGCTTATT TCCAGGACGC TTCACACTGA
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| Protein sequence | MKHPREVLLG AQAATAFLPV CDHYSGVEAR MRKSLQLQAE MIEEFGACVF DVTLDCEDGA
PVGGEADHAA MVVELAALAS DKARVAVRVH AVDHPAFESD MAIIAGKLAR QLSHIMIPKV
DSIEDVIRAE QALLAASAGN LPLHVLIESP LAVRNAFEIA AHPRVQSLSF GLMDFVSSHG
GAIPADGMSS QGQFTHPLVV RAKLEIASAC HAYGKVPSHC VVTEFNDSVA MILAARRASR
ELGYTRMWSI HPNQIRCILE AFAPSESEIE DATRIIAAGA RADWAPISFD GKLHDRASYR
YFWQVLERAH QTGSLLPIDA QAYFQDASH
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