Gene Pnap_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3025 
Symbol 
ID4689226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3195100 
End bp3196515 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content63% 
IMG OID639836038 
Productpeptidase U32 
Protein accessionYP_983245 
Protein GI121605916 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGGGC GCAAGTGCTT TTCAGCCCGA GGCCCGGACA ATCGCGGCAT GACGCTCAAG 
ACCCCTGAAC TCCTCCTTCC CGCCGGCTCG CTCGACAAAA TGCGCGCCGC CTACGACTTT
GGCGCCGATG CAGTCTATGC CGGCCAGCCA CGCTACTCCC TGCGCGCGCG CAACAATGAG
TTTCGTCTGG AACAGATCCA GACAGGCATT GAGGAAGCCC ACGCGCGCGG CAAGAAGTTC
TTTGTCACCA GCAACCTGCT GCCGCACAAC GACAAGGTGC GCACCTACCT GCGCGACATC
GCGCCGGTGA TTGCCATGAA ACCCGACGCG CTGATCATGG CCGACCCGGG CCTGATCATG
ATGGTGCGCG AACAATGGCC GGACATGGCG ATTCACCTGT CGGTGCAGGC CAACACCATG
AACTGGGCGG CCGTGAAGTT CTGGCAAAAG GTGGGCGTGG CGCGCATCAT TTTGTCGCGC
GAGCTGAGCC TGGACGAGAT CGAAAAGATC CGCCAGGAAT GCCCGGACAT CGAGCTTGAA
GTGTTCGTGC ATGGCGCGCT GTGCATGGCG TATTCGGGCC GCTGCCTGCT GTCGGGCTAC
TTCAACCGCC GCGACTCCAA CCAGGGCACC TGCACCAACG CCTGCCGCTG GAACTACACG
CCCGAGGCCG GCAGCGACCA GACCGATTCG GGCGAGGTCT TGCCGCTCAA GCTCGAAGGC
GATTTCGATT TTTCCGCAGA AGCGCAGGAA GCCGAGCAGT CGTTTTCAAG CTGCGGCAGC
GGCGCGCGCC ACCCGCTGGC CGACGGCGTC TATCTGCTCG AAGAAAAAGA GCGTCCCGGC
CAGCTCATGC CCATCATGGA AGACGAGCAC GGCACCTACA TCATGAACAG CAAGGACTTG
CGCGCCGTCG AACATGTCGA ACGGCTGGTG AAAATCGGCG TCGATTCGCT GAAGATCGAG
GGCCGTACCA AGAGCGGCTA TTACGTTTCG CGCACCGCGC AGGTCTATCG CCGCGCCATC
GACGACGCCG TGGCCGGCCG GCCGTTCAAC CCGGCCTTGA TCACCGAACT CGAAGGCTTG
GCCAATCGCG GCTACACCAG CGGATTCCTG GAACGGCGCC CGGCGCAGGA CTACCAGAAT
TACGAAACCG GCAGCTCTGA AATGCGCCGC AGCCAGTTTG CCGGCGAAGT CAAGTCCCAG
CACGACGGCT GGGCGGAAGT TGAAACCAAG AACCGTTTCC AGGTCGGCGA CTGGCTGGAA
GTGATTCACC CGGACGGCAA TCGCACCGTG CAGGTCACTT CCATGAAAAA CCTGGACGGC
GAAGAAATCA GCGTAGCCTC GGGCAGCCCG CTGCGCGTGC GGATTCCGCT GGAGGCCCCG
GCCGACGGGG CGCTGCTGGC GCGGCTGTTT GCATGA
 
Protein sequence
MTGRKCFSAR GPDNRGMTLK TPELLLPAGS LDKMRAAYDF GADAVYAGQP RYSLRARNNE 
FRLEQIQTGI EEAHARGKKF FVTSNLLPHN DKVRTYLRDI APVIAMKPDA LIMADPGLIM
MVREQWPDMA IHLSVQANTM NWAAVKFWQK VGVARIILSR ELSLDEIEKI RQECPDIELE
VFVHGALCMA YSGRCLLSGY FNRRDSNQGT CTNACRWNYT PEAGSDQTDS GEVLPLKLEG
DFDFSAEAQE AEQSFSSCGS GARHPLADGV YLLEEKERPG QLMPIMEDEH GTYIMNSKDL
RAVEHVERLV KIGVDSLKIE GRTKSGYYVS RTAQVYRRAI DDAVAGRPFN PALITELEGL
ANRGYTSGFL ERRPAQDYQN YETGSSEMRR SQFAGEVKSQ HDGWAEVETK NRFQVGDWLE
VIHPDGNRTV QVTSMKNLDG EEISVASGSP LRVRIPLEAP ADGALLARLF A