Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3012 |
Symbol | |
ID | 4686497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3179110 |
End bp | 3180039 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639836025 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_983232 |
Protein GI | 121605903 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTC CCCCCACCCC GCTCAAGCAT TACCTGCAGT TCAGCGACCT GAACGCCGAT GACTACGCCT ACCTGTTCGA GCGCGCCGCC CTGATCAAGA AAAAATTCAA GGCCTACGAA AGGCACCAGC CACTGATTGA CCGCACGATG GTGATGATTT TCGAGAAAGC CTCGACCCGC ACCCGCGTGA GCTTCGAGGC CGGCATGTAC CAGCTGGGCG GCACGGTCGT GAACCTCACC ACCGAAGGCA GCCAGCTGGG CCGCGCCGAA CCCATCGAGG ACAGCGCCAA GGTGATCAGC CGCATGGTCG ATCTGGTGAT GATCCGCACC TTCGAGCAGA CCAAGATCAA CCGCTTTGCC GAACACTCGC GGGTGCCGGT CATCAACGGC CTGACCAACG AATTCCACCC CTGCCAGATC CTGGCCGACA TCTTCACCTA CATCGAGCAT CGCGGCTCAA TCCAGGGCAA GACGGTGGCC TGGGTCGGCG ACGGCAACAA CATGGCCAAC ACCTGGCTGC AGGCCAGCGA AATCCTCGGC TTCAAGGTCC ACCTGAGCAC GCCCGGCGGC TACGAAGTGG ACCAGTCGAT TGCCGGCATC CGCTCCAGCG AAAGCTACCA GGTCTTCAAG GACCCCATGC AGGCCTGCGC CGGCGCCGAC CTCGTCACCA CGGATGTCTG GACCAGCATG GGCTATGAAG CCGAAAACGA AGCGCGCAAA AAGGCTTTTG CCGACTGGTG CGTGGACAGC GAGATGATGC GCGCCGCCAA ACCCGATGCG CTGTTCATGC ATTGCCTGCC GGCGCACCGG GGCGAGGAAG TCGAAGCCGA GGTGATCGAC GGCCCGCAAT CGGTGGTCTG GGACGAGGCT GAAAACCGGA TGCATGTGCA AAAGGCGCTG ATGGAATTCC TCTTGCTCGG CCGCCTGTAA
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Protein sequence | MSSPPTPLKH YLQFSDLNAD DYAYLFERAA LIKKKFKAYE RHQPLIDRTM VMIFEKASTR TRVSFEAGMY QLGGTVVNLT TEGSQLGRAE PIEDSAKVIS RMVDLVMIRT FEQTKINRFA EHSRVPVING LTNEFHPCQI LADIFTYIEH RGSIQGKTVA WVGDGNNMAN TWLQASEILG FKVHLSTPGG YEVDQSIAGI RSSESYQVFK DPMQACAGAD LVTTDVWTSM GYEAENEARK KAFADWCVDS EMMRAAKPDA LFMHCLPAHR GEEVEAEVID GPQSVVWDEA ENRMHVQKAL MEFLLLGRL
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