Gene Pnap_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3006 
Symbol 
ID4686805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3173509 
End bp3174177 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID639836019 
Productankyrin 
Protein accessionYP_983226 
Protein GI121605897 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG TCACACCCCA GAAGATGCTG TTTGCCTTGC TGGTGTCAGC AGGCACGTCC 
CTCATGCCGG CGCTTGCGCA GCAGGGGGCG GACAAGATCA ACCTCAACGG CGAGCTGGTC
CTGGCGGCCA AGGCGGGCCG CACCGAACGC GTGGCGGCCT TGCTCGCGCA GGGCGCGGCC
GTCAATTCGC GCGACCGCAA TGGCGACTCC CCGCTGAACA TGGCGGCCAG CAAGGGCAAC
GAAGCGCTGG CGCAGGTGCT GCTGCAGGCC GGCGCGGATG TGAACCTGGC CAACATTTCA
GGCGTGACAC CCCTGATGGG CGCGGCGTTC AAGGGCAATG CGCCGCTCGT TCGCAAGCTG
ATGGCCGCTG GCGCCAGGAT CGACCCGCTG GATCGCGTGA AGAAAAATGC CGCCATCTAC
GCCGCGGGCG TCGGCTGCAG CGAATGCCTG GCCGAATTCC TGCGCGCCGG CGCCCCGGTC
AATGCGCGCA TGGACAACGA CGAAACGCTG CTGATGTGGG CGGCAGGCTA CGGGAACACG
GCAACGGTGC AGTTCTTGCT CGACCAGGGC GCCGACCGCA GCCTGAAGGA CAACCGGGGC
AAGACCGCCG CCGACATGGC GCGCGATGGA AATTTCACGG CAGCGCTCAG GCTGCTGGAA
AACAGCTGA
 
Protein sequence
MKTVTPQKML FALLVSAGTS LMPALAQQGA DKINLNGELV LAAKAGRTER VAALLAQGAA 
VNSRDRNGDS PLNMAASKGN EALAQVLLQA GADVNLANIS GVTPLMGAAF KGNAPLVRKL
MAAGARIDPL DRVKKNAAIY AAGVGCSECL AEFLRAGAPV NARMDNDETL LMWAAGYGNT
ATVQFLLDQG ADRSLKDNRG KTAADMARDG NFTAALRLLE NS