Gene Pnap_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3003 
Symbol 
ID4686264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3168561 
End bp3169412 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID639836016 
Producthypothetical protein 
Protein accessionYP_983223 
Protein GI121605894 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAA ATCTGGCCGT CCCGTCTCCG CTGCAATATT TTTCAAGCCT CGTGCAAAGC 
GATGCGCAGT TTCCCTTGCT GGAAGCCGCC GTCAGCCTGG CGCAGGACGA ATATCCCGAC
CTGGATGTGG AGCAGGTTCT GGGCGATGTC GATCAGTTGC TGGCCCGCCT CAAGCGCCGC
CTGCCCAGCG ACGCCCCCGA GCTGCAGCGC CTGCGCACGC TGAACCAGTT CTTTTTCCGA
GATCTGGGCT TTGGCGGCAA CATCAACGAC TACTACGACC CCGACAACAG CTACCTGAAC
ACGGTGCTGC GCACGCGGCG CGGCATTCCG ATCACGCTCG CCGTGCTGTG GCTGGAGCTG
GCGGTGGGCC TGGGGCTGAA CGCGCGCGGC GTGGCTTTTC CGGGGCATTT CATGGTCAAG
GTCAACCTGC CCAAGGGCCA GGTGGTGATC GACCCGTTCA ACGGCCAGTC ATTGAGCCGC
GAGGAACTGG CCGAGCGGCT GGAGCCTTTC CGGCAGCGCA GCGGCATCAG CGACGAGTTC
GAGGTGCCGA TGGGGCTGTA CCTGCAGTCC GCGCCGCCCC GCGACATCAT CAGCCGCATG
CTGCGCAACC TGCAGGAAAT CCACAAGACC CAGGAAGACT GGCCGCGCCT GATTGCCGTG
CAGGACCGCC TGATCGTGCT GCAGCCCGAT GCCTGGACCG AATACCGCGA CCGGGGCCTG
GCCTGGGCCG CGCAGGGCGA CGTGGCCTAT GCGGTCGCCG ACCTGGAAAC CTACCTGGCG
CATGCCGACG ATGCGCTCGA CATCGACGCC ATCGCCGAAC GCGTGGCCCA GTTGCGCCGC
TCCAGCCATT GA
 
Protein sequence
MQLNLAVPSP LQYFSSLVQS DAQFPLLEAA VSLAQDEYPD LDVEQVLGDV DQLLARLKRR 
LPSDAPELQR LRTLNQFFFR DLGFGGNIND YYDPDNSYLN TVLRTRRGIP ITLAVLWLEL
AVGLGLNARG VAFPGHFMVK VNLPKGQVVI DPFNGQSLSR EELAERLEPF RQRSGISDEF
EVPMGLYLQS APPRDIISRM LRNLQEIHKT QEDWPRLIAV QDRLIVLQPD AWTEYRDRGL
AWAAQGDVAY AVADLETYLA HADDALDIDA IAERVAQLRR SSH