| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2999 |
|---|
| Symbol | |
|---|
| ID | 4686519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3165028 |
|---|
| End bp | 3165363 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639836012 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_983219 |
|---|
| Protein GI | 121605890 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5606] Uncharacterized conserved small protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.749674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC GACTCATTGA CGGGATCGAA GTACAACAGG GTTCGGGCAA CGTCTATGCC
GATCTGGGTC TGCCAGACGC GGAAAAGCTC AAGATCAAAA CCGGCTTGGT GATCGAAATC
AGAAAAGCCA TGCGCAGCCT TGGCCTGACG CAGCAAGAAG CGGCCAAGCG CATGGGCATC
ACTCAACCCA AGGTGTCCGG CATGATGCGC GGTGACTTCG CCAACCTTTC GGAGCGCAAG
CTAATGGACT GCCTGACACG GCTGGGCTAC GACATCGAGA TCAGCGTGCG CCCCGCCAAG
GCAGCGCTTG GGCATCTGGT GCTTGCCTCT GCGTAA
|
|---|
| Protein sequence | MKKRLIDGIE VQQGSGNVYA DLGLPDAEKL KIKTGLVIEI RKAMRSLGLT QQEAAKRMGI
TQPKVSGMMR GDFANLSERK LMDCLTRLGY DIEISVRPAK AALGHLVLAS A
|
|---|
| |