Gene Pnap_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2998 
Symbol 
ID4686149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3164670 
End bp3165047 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content54% 
IMG OID639836011 
Producthypothetical protein 
Protein accessionYP_983218 
Protein GI121605889 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.553466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGTA ACGAAAAACC GCTCGAATGG ATCGGCAGCA GCCACAAGGA CTTGATGACA 
CTGCCAGCGG ATGTACGGCG GTTTTTCGGT TTTGCCTTGT CATTGGCACA AGCCGGTGAT
CGGCACGACG CGGCCAAGGT GCTCAAAGGC TTTGGTGGTG CCGGGGTTCT TGAGGTGGTG
GAAGACGATG TTGGCGGCAC CTACCGCGCC GTGTACACCG TGAAGTTTGC ACAAGCAGTG
TTCGTCCTCC ACTGCTTCCA GAAGAAAAGC AAGCGCGGCA TTGCCACGCC AAAGGAAGAG
ATGGACATTA TTCACGCTAG GCTCAAAGTG GCTGAGGCAT TTGCAAAGGA GTTGCGAAAT
GAAAAAACGA CTCATTGA
 
Protein sequence
MPSNEKPLEW IGSSHKDLMT LPADVRRFFG FALSLAQAGD RHDAAKVLKG FGGAGVLEVV 
EDDVGGTYRA VYTVKFAQAV FVLHCFQKKS KRGIATPKEE MDIIHARLKV AEAFAKELRN
EKTTH