Gene Pnap_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2997 
Symbol 
ID4687800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3163351 
End bp3164013 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID639836010 
Producttransposase 
Protein accessionYP_983217 
Protein GI121605888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.434807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGC CGCCAGCGAG CGCCGCCTTC GTGGCCGCCA TGGAAAAGGT GCTGGACATC 
TACAGCCGCC CTATGGACGC GAAGCACCCC GTGGTGTGCA TGGATGAGAC GCCTCGCCAG
CTCATTCGCG AGACCCGCGA GCCTATTGCA GCGGCGCCCG GGCGGCCCGA GCGCCATGAC
TACGAATACG AACGCTGCGG CGTGTGCAAC GTGTTCATGG CTAGCGAGCC GCTGGCCGGG
CGGCGCCTAA CCAAGGTCAC TGAGCGGCGG ACCAAAACGG ACTGGGCGGT GTTCGTGCAG
GACATTGCCG CCAGCTACCC CGACGCCGAG CGCATCACAC TCGTGATGGA CAACCTCAAC
ACCCACACCC CGGGCTCACT GTACGAGGCG TTTTCCCCCG AGCAGGCCAA GGCGCTGTGG
GACCGCTTCG AGTTCGTCTA CACGCCCAAG CACGGCAGCT GGCTGAACAT GGCCGAGATC
GAAATCAACG TTATGGTGGA TCAGTGCCTG AGCCGGCGCA TCGACAGCAT CGAGACCGTG
CGCAGCGAAG TCGCTGCCTG GCAGGCCCGC CGCGACAACC TTCAGGCCAA AGTCAACTGG
CAATTCACAA CCAAGGATGC CCGCATCAAG CTAAAACGCC TTTACCCGAC AACTTCCTCA
TGA
 
Protein sequence
MIAPPASAAF VAAMEKVLDI YSRPMDAKHP VVCMDETPRQ LIRETREPIA AAPGRPERHD 
YEYERCGVCN VFMASEPLAG RRLTKVTERR TKTDWAVFVQ DIAASYPDAE RITLVMDNLN
THTPGSLYEA FSPEQAKALW DRFEFVYTPK HGSWLNMAEI EINVMVDQCL SRRIDSIETV
RSEVAAWQAR RDNLQAKVNW QFTTKDARIK LKRLYPTTSS