Gene Pnap_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2994 
Symbol 
ID4688637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3160968 
End bp3162005 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID639836007 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_983214 
Protein GI121605885 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.652409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA CCCCCCTTTC CTACAAAGAC GCCGGCGTTG ACATCGACGC GGGCGACGCC 
CTGGTTGAAC GCATCAAGCC GCTGGCCAAA AAGACCATGC GCGAAGGCGT GCTGGCCGGC
ATCGGCGGCT TTGGCGCGCT GTTCGAGGTG CCCAAGCGCT ACAAGGAACC GGTGCTGGTC
AGCGGCACCG ACGGCGTGGG CACCAAGCTC AAGCTGGCCT TTGAATGGAA CATGCACGAC
ACCGTCGGCA TCGACCTGGT CGCCATGAGC GTCAACGACG TGCTGGTGCA AGGCGCCGAG
CCACTGTTTT TCCTCGACTA TTTCGCCTGC GGCAAGCTCG ATGTGAACAC CGCTGCAGCG
GTGGTTGGCG GCATCGCCAA GGGCTGCGAG CTGAGCGGCT GCGCGCTGAT CGGCGGCGAA
ACCGCTGAAA TGCCCGGCAT GTACCCGTCC GGCGAATACG ACCTGGCCGG TTTTGCCGTC
GGCGCGGTGG AAAAATCCAA AATCCTGACC GGCAAGGACG TGACCCCCGG CGACGTGGTG
CTCGGCCTGG CTTCAAGCGG CGTGCATTCC AATGGTTTCA GCCTGGTGCG CAAGTGCATC
GAGCGCGCCG AAGCCGCCGG TACCGTTCCC GCCACGCTGG ACGGCCAGCC GTTCAAGCAG
GCGCTGATGG CCCCTACCCG TCTCTACGTG AAAAACGTGC TGGCCGCGCT GGCCGCGCAC
CCGATCAAGG CGCTGGCCCA CATCACCGGC GGCGGCCTGC TGGAAAACAT TCCCCGCGTG
CTGCCCGAAG GCACGGCCGC GCACCTGACC AAAGGCAGCT GGCCGCAGAC CGAGCTGTTT
GCCTGGCTGC AGGCGACTGC CGCGATTTCT GATTTTGAAA TGAACCGCAC GTTCAACAAC
GGCATCGGCA TGGTGGTGGT GATCGACGCG GCCAGCGCTG GCGCCTGCGC CGCCATGCTG
CGGGAAGCGG GCGAGACGGT CTATGAGATT GGCGTGATTG CGGCGCGTGG TGAAGGTGCC
AGCGTTACCG TGGGCTGA
 
Protein sequence
MTTTPLSYKD AGVDIDAGDA LVERIKPLAK KTMREGVLAG IGGFGALFEV PKRYKEPVLV 
SGTDGVGTKL KLAFEWNMHD TVGIDLVAMS VNDVLVQGAE PLFFLDYFAC GKLDVNTAAA
VVGGIAKGCE LSGCALIGGE TAEMPGMYPS GEYDLAGFAV GAVEKSKILT GKDVTPGDVV
LGLASSGVHS NGFSLVRKCI ERAEAAGTVP ATLDGQPFKQ ALMAPTRLYV KNVLAALAAH
PIKALAHITG GGLLENIPRV LPEGTAAHLT KGSWPQTELF AWLQATAAIS DFEMNRTFNN
GIGMVVVIDA ASAGACAAML REAGETVYEI GVIAARGEGA SVTVG