| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2992 |
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| Symbol | |
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| ID | 4689289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3159276 |
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| End bp | 3159983 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639836005 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_983212 |
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| Protein GI | 121605883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.623044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC GGGTAGAAGC TGACAAGAAA AGCCCAAAGG CGCCTCTTAA ATTGGCATTG
TTCGATCTGG ACCACACCCT GATCCCGATT GACTCCGACT ATGAATGGGG CGAATTCACG
ATTGCGCTGG GCTGGTGTGA CGCGACCGAA TTCAAGCGCC GCAATGCCGA GTTCTTTGAG
CAATACCGGG CCGGAACGCT CGACATTCAC GACTATGTGC GTTTTGCCAC GCAGGCCATC
CGCGAGCAGG GGACTATCAA TTCAATAGCT GCTCACGCCC GGTTCATGAG CGAGATCGTG
CAAAAAGTCA TCAAAAGCCA GGCGCTTGAA CTGGTCGGGC AGCACCGGGC GGCCGGCGAC
GAGTTGGTCA TCGTGACGGC GACCAACGAG TTCGTGACGC GTCCGATTGC CGATGCCTTC
GGCGTGTCGG AGCTGATCGC GGTCGAACTG GAGCGCGATG CGCAAGGCCA CCTGACCGGC
GAGATCAGGG GCACGCCGTC GGCTAGAGAA GGCAAGGTCA CGCGCATGGA ACAATGGCTG
GCCGCCCGCA GCCTGGGCTG GGGCGATGTG CACAGCACGT TTTACACCGA TTCGATGAAC
GACCTGGCGC TGCTGGAAAA GGTCACCGAC CCCGTCGCTA CCAACCCGGA CCCGCGCCTG
CGCGCCCTGG CCCTTGAGCG TGGATGGCGC ATACTTGACC TGTTTTAA
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| Protein sequence | MTVRVEADKK SPKAPLKLAL FDLDHTLIPI DSDYEWGEFT IALGWCDATE FKRRNAEFFE
QYRAGTLDIH DYVRFATQAI REQGTINSIA AHARFMSEIV QKVIKSQALE LVGQHRAAGD
ELVIVTATNE FVTRPIADAF GVSELIAVEL ERDAQGHLTG EIRGTPSARE GKVTRMEQWL
AARSLGWGDV HSTFYTDSMN DLALLEKVTD PVATNPDPRL RALALERGWR ILDLF
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