| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2981 |
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| Symbol | |
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| ID | 4687386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3147566 |
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| End bp | 3149335 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639835994 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_983201 |
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| Protein GI | 121605872 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0901758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTTC ATCAGTTGAC GGACCCAAGG GGGATAGGCG TCGTATTTCA GTCGAGCCCG
CGCCCGCTAT GCTTGCACCC CATGTACTCG CACCATTTCG GCCTGACGCA AGATCCGTTT
TCCATCGCGC CCGACCCGCG CTACCTGTTC ATGAGCGAGC GCCACCGGGA GGCGCTGGCG
CACCTGCTCT ACGGCGTGGC CGGCCCGCAC GGCGCGGCCA GCGGCACGGG CGGGGGCTTT
GTGCTGCTCA CGGGCGACAT CGGCACCGGC AAGACCACCA TCTGCCGCTG CTTCATGGAG
CAGATTCCCG CCGGCTGCCA TGTCGCCTAT ATCTTCAACC CCAAGCTCAC GGTCACCGAA
CTGCTGCAGT CGATCTGCGA GGAGTTCCAC ATTGCGGTGG CGGCGGCCTC CAGCCCGCCC
ACGCTCAAGA ACTACATCGA CGCGCTGAAT GCCTTTTTGC TGCAAAGCCA CGCCGCCGGG
CAAAGCAGCG TGCTGATCAT CGACGAGGCG CAGAACCTCA GCGCCGATGT GCTGGAGCAG
TTGCGCCTCT TGACCAACCT GGAAACCAGC GAGCGCAAGC TGCTGCAGAT CGTGCTGATC
GGCCAGCCCG AGTTGCGCGC GATGCTGGCC CGCCCCGAAC TGGAGCAACT GGCCCAGCGC
GTGATCGCGC GCTTTCACCT CGACGCGCTG ACCGAGGCCG AGAGCGCGCA GTACATCCGG
CACCGCCTGG ACGTGGCCGG GCTCGCCGGC CCGCTGCCGT TTGACCGCGC CTCGCTCAAG
CGCATCCACC GCCTCGCGCG CGGGGTGCCG CGCCGCATCA ACCTGCTGTG CGGGCGCGCG
CTGCTCGGGG CGTGGGCCAA TGGCCTGCAC CGCGTTGACC GCAAGATGGT GGACAAGGCG
GCGGCCGAGG TGTTCGGACT TGATGCCGGG CCGGCGCCGA ACGCCGGCGC ACGGCCCGCA
GCCTACGCGC TGGGCGGCTT CGCGCTGCTG GCCGGGGCCG CGCTGGCGGG CTTCCTGGTC
CTGAACCCTG CGCAAAAGGC AGCGCGGCCG GCTCAACCGA CGGCGTCAGC GTTGCCGGCC
TCGCCAGCAG CCCCCCAGGC GAAGGCTTCG TCGCCCATCC GGGCCGAGCC GCCCGCCCCG
AGTCCGGCCG AAGAGATCGA AGCCCTGCTG CCGCAACTGC CGGCCGACAT CAATGCGGCC
TGGCGCGAAC TGGCGCCCAC CTGGAAACTG TCCCTGGCGG GCGGCGACCC CTGCCAGGCC
GCCAGCGCGC AGCAACTGCT GTGCTACCGC ACCGACAGCC TGACCATGCC GCTGCTGCGC
CAGCTCGGCC GCCCCGGCAT CCTGACGCTG CGGGCGGGCA ATGGCCAGCC GGTGCATGCC
GTCCTCGTCG GCCTGAGCGA GCAGAGCGCC ACGCTGCTGG TGGCGGGCAG CCGGCACACC
GTCAGGCTGG TCTCGCTGGG CCGGCTGTGG CGCGGCGATT TTGCGACTTA CTGGCGTCCG
CCGCCGGGCT ACACCGCAGG CCTGCAGGGC GCCAGCACCG GCCCGGTGAT CCAGCGTCTC
GCCAGCCAGC TGGCCCTGCT CGACGGAGCG CCTGCGCCGC TCGCTTCCAC TGCCCCGCCT
GTTCTGGACG CGGCCCTGAG GGCGCGCGTG CGGGCCTTTC AGCGCGCCCA GGGGCTGGAG
GCTGACGGGC AGCCCGGCCC CATGACCTTC ATGCAGATCG ACCGCGCCAC CCATGCGGAT
GAGCCGCGCC TGCAAACCAA CCCGCGATAA
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| Protein sequence | MRLHQLTDPR GIGVVFQSSP RPLCLHPMYS HHFGLTQDPF SIAPDPRYLF MSERHREALA
HLLYGVAGPH GAASGTGGGF VLLTGDIGTG KTTICRCFME QIPAGCHVAY IFNPKLTVTE
LLQSICEEFH IAVAAASSPP TLKNYIDALN AFLLQSHAAG QSSVLIIDEA QNLSADVLEQ
LRLLTNLETS ERKLLQIVLI GQPELRAMLA RPELEQLAQR VIARFHLDAL TEAESAQYIR
HRLDVAGLAG PLPFDRASLK RIHRLARGVP RRINLLCGRA LLGAWANGLH RVDRKMVDKA
AAEVFGLDAG PAPNAGARPA AYALGGFALL AGAALAGFLV LNPAQKAARP AQPTASALPA
SPAAPQAKAS SPIRAEPPAP SPAEEIEALL PQLPADINAA WRELAPTWKL SLAGGDPCQA
ASAQQLLCYR TDSLTMPLLR QLGRPGILTL RAGNGQPVHA VLVGLSEQSA TLLVAGSRHT
VRLVSLGRLW RGDFATYWRP PPGYTAGLQG ASTGPVIQRL ASQLALLDGA PAPLASTAPP
VLDAALRARV RAFQRAQGLE ADGQPGPMTF MQIDRATHAD EPRLQTNPR
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