Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2971 |
Symbol | |
ID | 4690036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3139238 |
End bp | 3140326 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835984 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_983191 |
Protein GI | 121605862 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0747597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA GATTCCCCAC AAGCCGCCTG TTCTGGAAGC TTTTTCTGGC CATCTGGCTG GCGACGATGC TGACGTTTGT GTGCGGCGCG CTCTACATCA TGCTGAGCGG CGAGCATTTT CCAGACCATC CAAGGCCCGG CTTTCCCTGG CTGCCCGTGC TGTCTGCCTC GGTGGCCAAC GGCTTGGTCA GCATGGGCCT GGCCTGGTAT TTGTCACTGC CGCTGCGGCA CCTGCGCTGG GCGCTGCGCC GGGTCGCCGA GGCCCAGTTC GACACCCGCA TCGTGCCCCT GATGGGCGCG CGGCGCGATG AAATCGTGGA CCTGGCGGGC GAATTCGACA GCATGGCCGC ACGCCTGCAG CAGCTGACCC AGCAGCGCCA GCAGCTGTTT CACGATGTCT CGCACGAGTT GCGCTCGCCC CTGGCGCGCA TGCAGGCAGC CATCGGCCTG ATGCACCAGA ACCCGGCGCA GACAGGGCCC ATGGTCGAGC GCATCGAATG CGAGACGCAG CGCATGGACG TGCTGATCGA GGAACTGCTC ACCTTTCACC GGCTGGAAGC CGGCACGCCC ATCTCCCAGC GCGGCCGCAC CGATGTGATC GAGTTGCTCA CGGCGATTTC GCACGACGCC TCTTTCGAAG CCGCCATGCG CGGCTGCTCG GTGGTGTTCT CGGCGAGCGA CGAGTTCGTG GCCGAGGTCG ATGGCGAGCT GATCTACCGC GCTTTTGAAA ACGTGATCCG CAATGCCGTC AAGTACACGG CGCCCGGCAG CCCGGTCCAG ATCAGCGCGT GCATTCTCGA AAACACCCAG GGCGCCAGCG CGGCGAGCCC GGCCAGACGC ATGCTGCAGG TCACGGTGCA GGACCAGGGG CCGGGCGTGG CGGCGGAGTT TTGCGAACGC ATCTTCGAGC CCTTCCAGCG GCTTGGAGAC ATGGCGCCCA AGCCGTTGAC GCCAGCCAGG CCGGTGCCGG GCACCGGCCT GGGGCTGGCC ATCGCGCGGC GCGCCATCGC CGCGCACGGC GGCACGATAC GGGCTTTTCC GGGCAGCGGC GGCGGGCTGT GCGTGACGAT TCTGATTCCG TCGAACTGA
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Protein sequence | MTIRFPTSRL FWKLFLAIWL ATMLTFVCGA LYIMLSGEHF PDHPRPGFPW LPVLSASVAN GLVSMGLAWY LSLPLRHLRW ALRRVAEAQF DTRIVPLMGA RRDEIVDLAG EFDSMAARLQ QLTQQRQQLF HDVSHELRSP LARMQAAIGL MHQNPAQTGP MVERIECETQ RMDVLIEELL TFHRLEAGTP ISQRGRTDVI ELLTAISHDA SFEAAMRGCS VVFSASDEFV AEVDGELIYR AFENVIRNAV KYTAPGSPVQ ISACILENTQ GASAASPARR MLQVTVQDQG PGVAAEFCER IFEPFQRLGD MAPKPLTPAR PVPGTGLGLA IARRAIAAHG GTIRAFPGSG GGLCVTILIP SN
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