Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2966 |
Symbol | |
ID | 4688247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3131483 |
End bp | 3132283 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639835979 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_983186 |
Protein GI | 121605857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0602503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00558879 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCATTC GCAAATACAA CTACCCGGTG CCCGTGCTGG CGCTGGCGGG CGCCGTCCTG GGTTCCTCGG CCGCCATGGC CCAGCCCTTT GACGACAGCT GGAAATTCAG CGCCGGCGCC GGCGTGGTCA GCCATGCCAA ATACCCCGGC AGCGGCGCCA CCGAAGTCAG CGCCTTTCCG ATGCTCAGCG CGAGCTATGG CCGCTTCATC ATCGGCGGCC TGCCGGGCGC GGGCATTCCG CTGGGCGTGG GCGCCCACCT GCTCAGAAAC GAGCATTGGC ACGCCGGCAT CGGCCTGGGC TCGACCCTGG GCAAGGCCCG TGAAGAGTCC GACTCGGCCA CGCTGCGGGG CCTGGGCGAC ATTGACGGCA CCGTGTTCGT CAGTGCCTTC GGCAGCTACA CCGACAAATG GTTTGCCGTG CGCGGCAGCG TGGTGACCGA CGCCGCAGGC AAGGACCAGG GCACTCGCCT GCTGATGGAC CTGGAAGGCA AGTACCCCGT GAACGAGCGC CTGATGCTGA CAGCCGGCCC CGGCTTCACC TGGGCCGACA GCAAGTACAG CCAGACCTTC TTCGGCATCA GCGCCGCCCA AAGCGCCAGC TCCGGCCGCG CCGCCTACAC CGCCGTATCG GGCATCAACA GCGTGCGCTT CAGCCTGGGC GCCAATTACC TGCTCACGCC GCAATGGGGC CTGGGCGCTC GGGTGACCGC CGAAAGACTG CGCGGCGACG CCGCCAGCAG CCCGGTGACC GAACAGAAAT CCCAGAACAG CGTCGGCCTG TTCGCCAACT ACCGCTTCTG A
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Protein sequence | MTIRKYNYPV PVLALAGAVL GSSAAMAQPF DDSWKFSAGA GVVSHAKYPG SGATEVSAFP MLSASYGRFI IGGLPGAGIP LGVGAHLLRN EHWHAGIGLG STLGKAREES DSATLRGLGD IDGTVFVSAF GSYTDKWFAV RGSVVTDAAG KDQGTRLLMD LEGKYPVNER LMLTAGPGFT WADSKYSQTF FGISAAQSAS SGRAAYTAVS GINSVRFSLG ANYLLTPQWG LGARVTAERL RGDAASSPVT EQKSQNSVGL FANYRF
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