Gene Pnap_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2966 
Symbol 
ID4688247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3131483 
End bp3132283 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID639835979 
ProductMltA-interacting MipA family protein 
Protein accessionYP_983186 
Protein GI121605857 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0602503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00558879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATTC GCAAATACAA CTACCCGGTG CCCGTGCTGG CGCTGGCGGG CGCCGTCCTG 
GGTTCCTCGG CCGCCATGGC CCAGCCCTTT GACGACAGCT GGAAATTCAG CGCCGGCGCC
GGCGTGGTCA GCCATGCCAA ATACCCCGGC AGCGGCGCCA CCGAAGTCAG CGCCTTTCCG
ATGCTCAGCG CGAGCTATGG CCGCTTCATC ATCGGCGGCC TGCCGGGCGC GGGCATTCCG
CTGGGCGTGG GCGCCCACCT GCTCAGAAAC GAGCATTGGC ACGCCGGCAT CGGCCTGGGC
TCGACCCTGG GCAAGGCCCG TGAAGAGTCC GACTCGGCCA CGCTGCGGGG CCTGGGCGAC
ATTGACGGCA CCGTGTTCGT CAGTGCCTTC GGCAGCTACA CCGACAAATG GTTTGCCGTG
CGCGGCAGCG TGGTGACCGA CGCCGCAGGC AAGGACCAGG GCACTCGCCT GCTGATGGAC
CTGGAAGGCA AGTACCCCGT GAACGAGCGC CTGATGCTGA CAGCCGGCCC CGGCTTCACC
TGGGCCGACA GCAAGTACAG CCAGACCTTC TTCGGCATCA GCGCCGCCCA AAGCGCCAGC
TCCGGCCGCG CCGCCTACAC CGCCGTATCG GGCATCAACA GCGTGCGCTT CAGCCTGGGC
GCCAATTACC TGCTCACGCC GCAATGGGGC CTGGGCGCTC GGGTGACCGC CGAAAGACTG
CGCGGCGACG CCGCCAGCAG CCCGGTGACC GAACAGAAAT CCCAGAACAG CGTCGGCCTG
TTCGCCAACT ACCGCTTCTG A
 
Protein sequence
MTIRKYNYPV PVLALAGAVL GSSAAMAQPF DDSWKFSAGA GVVSHAKYPG SGATEVSAFP 
MLSASYGRFI IGGLPGAGIP LGVGAHLLRN EHWHAGIGLG STLGKAREES DSATLRGLGD
IDGTVFVSAF GSYTDKWFAV RGSVVTDAAG KDQGTRLLMD LEGKYPVNER LMLTAGPGFT
WADSKYSQTF FGISAAQSAS SGRAAYTAVS GINSVRFSLG ANYLLTPQWG LGARVTAERL
RGDAASSPVT EQKSQNSVGL FANYRF