| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2957 |
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| Symbol | |
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| ID | 4688618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3117555 |
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| End bp | 3118205 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639835969 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | YP_983177 |
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| Protein GI | 121605848 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00587687 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCGAA ACAGTATTTA TGGCGGCTAC AACAGCCCGC AAGCCGCTAG CCAGGAAATC
CAGGGCTTGG GCATGGTGCC CATGGTCATT GAGCAGTCCG GCCGTGGTGA GCGTTCTTAC
GACATTTATT CGCGGTTGCT CAAGGAGCGC GTCATTTTCC TGGTCGGCCC GGTCAATGAC
CAGACGGCCA ATCTGGTGGT GGCCCAGTTG CTGTTTCTGG AAAGCGAAAA TCCTGACAAG
GACATTTCTT TTTACATCAA CTCGCCCGGC GGTTCAGTCA CGGCTGGCAT GGCAATTTAC
GACACCATGC AATTCATCAA GCCGGACGTG TCCACGCTGT GCGTCGGCAT GGCCGCCAGC
ATGGGTGCGT TTTTGCTGTC GTCCGGTACC AAGGGCAAAC GTTTTTCGCT GCCCAATTCG
CGTGTGATGA TTCACCAGCC ATCGGGTGGC GCGCAGGGTC AGGCATCGGA TATTGAAATC
CATGCCCGTG ATATCCTGAA GACGCGCGAC CAGCTCAATC GCATTCTGGC CCACAACACC
GGCCAGACGG TTGAAAAAAT CGAGCGCGAT ACAGAGCGCG ACTACTTCAT GTTCGCCGAT
GAGGCGAAGG CTTATGGCGT CGTCGATCAG GTGATATCAA AACGGCCCTG A
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| Protein sequence | MVRNSIYGGY NSPQAASQEI QGLGMVPMVI EQSGRGERSY DIYSRLLKER VIFLVGPVND
QTANLVVAQL LFLESENPDK DISFYINSPG GSVTAGMAIY DTMQFIKPDV STLCVGMAAS
MGAFLLSSGT KGKRFSLPNS RVMIHQPSGG AQGQASDIEI HARDILKTRD QLNRILAHNT
GQTVEKIERD TERDYFMFAD EAKAYGVVDQ VISKRP
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