Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2953 |
Symbol | |
ID | 4686181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3111347 |
End bp | 3112123 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639835960 |
Product | ABC transporter related |
Protein accession | YP_983173 |
Protein GI | 121605844 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.121974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT CTGAAATCTC GTCTGATGTC TCGCCTGAAG TCCTGCTGCG CGGGCGCGAA ATTACCCGCC GCTGGGGCGG CCTGTTGGCG CTCAGCGGCG TGTCGCTGGA TCTGGCGCGC GGCAGCGTGC ATGCCGTGAT TGGCACCAAC GGCGCCGGTA AATCCACTTT AATCAACATC CTGTCCGGCG AAATTCCGCC TTCAAGCGGC AGCGTCGAAC TGCTCGGCCA GGAGGTGACG GGCTGGACGC AACCGCGGCG TGCCCGCCTG GGCCTGGGTC GCAGCTACCA GCGCAACACC ATCTACCCCA GCTTCAGCGT GTTCGAGAAC TGCCGGCTGG CCGCGCAGGC CGCCACCCAG AGGCCGTGGC AATGGTGGCG CAGCGCGCAG CATTGCGATG CCAGCCTGTC GGCCGCGCAC GATGCGGCGT CCCGCGCCGG CCTGAACGAC TTGCTCGACC GCCCGGCCGG ATTGCTATCG CACGGGCAAA AGCGCCAGCT CGAAATCGCC ATGTGCCTGG CCACAGCGCC ACAGGTGCTG CTGCTCGACG AACCGCTGGC CGGCATGGGC GCGGAAGAGA CCGAGCGCAT GCTCGCGCTG CTGGCCGAAC TCAAGCCCGG CCATGCCATC TTGCTGGTCG AACACGACAT GGATGCGGTG TTCCGCATTG CCGAGCGCAT CACCGTCATG GTCAATGGCG CTGTGATTGC CAGCGACACG CCCGCCGGCA TCCGCAGCAA CCCGCAGGTG CAGGCCGCCT ATCTTGGAGA CCATTGA
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Protein sequence | MKPSEISSDV SPEVLLRGRE ITRRWGGLLA LSGVSLDLAR GSVHAVIGTN GAGKSTLINI LSGEIPPSSG SVELLGQEVT GWTQPRRARL GLGRSYQRNT IYPSFSVFEN CRLAAQAATQ RPWQWWRSAQ HCDASLSAAH DAASRAGLND LLDRPAGLLS HGQKRQLEIA MCLATAPQVL LLDEPLAGMG AEETERMLAL LAELKPGHAI LLVEHDMDAV FRIAERITVM VNGAVIASDT PAGIRSNPQV QAAYLGDH
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