Gene Pnap_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2949 
Symbol 
ID4686225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3107299 
End bp3108114 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID639835956 
Productalpha/beta hydrolase fold 
Protein accessionYP_983169 
Protein GI121605840 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.545682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.28971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGG CGGCGTTCAT CGACATCGAC TGGGCGGGTC GCCCGGTCCG CATCGAATAT 
CAGTGGATTG CCCGCGACCG GGCGGCCGCG CCGCTGATCG TCTTTTTGCA TGAAGGCCTG
GGTTCGGTGG CGATGTGGAA GGATTTTCCG CAGCGCCTGT GTATTGCCAC CGGCTGCCGG
GGGCTGGTGT ATTCGCGCCC GGGCTATGGC CGCTCGACGC CGCGCGCCGC CGAAGAAGCC
TGGGGCCTGG ACTTCATGCA CCGCCAGGCG CAGGAAGTGC TGCCCGCCCT GCTGGAAGCG
CTGGGCATTG ACGCAACGCG GGACAAGCCC TGGCTGCTGG GCCACAGCGA TGGCGCCTCC
ATCGCCCTGC TTTACGCCGC GAGCTACCCG CAGCGCATCG CCGGCGCCAT CGTGCTGGCT
CCCCATATCC TGGTGGAAGA CCTGTCGGTG AGCAGCATTG AAAAAGTGCG CGCAGCCTAC
CTTGAAACCG ACCTGCGGCA ACGCCTGGCG CGCCACCACG ATGATCCGGA TTCAGCCTTC
TGGGGCTGGA ACGATATCTG GCTCAAGCCG GCGTTCAGGC ACTGGTCGAT TGAAGCCGAG
ATCAGCGCCA TCCGCTGCCC GTTGCTGGCC GTGCAAGGCC TGGACGACGA ATACGGCACG
CTGGCGCAGA TCCACGGCAT TGCGCGCCGG GCGGCACAGA CCGAACTGTT TGAGCTGGCC
GATTGCGGCC ATTCCCCACA CCGCGACCAG CCCGAACGCC TGATCACGGC CATCACTGCT
TTCATTCAAC AACAACCCCA CGGAGACAAA CCATGA
 
Protein sequence
MTEAAFIDID WAGRPVRIEY QWIARDRAAA PLIVFLHEGL GSVAMWKDFP QRLCIATGCR 
GLVYSRPGYG RSTPRAAEEA WGLDFMHRQA QEVLPALLEA LGIDATRDKP WLLGHSDGAS
IALLYAASYP QRIAGAIVLA PHILVEDLSV SSIEKVRAAY LETDLRQRLA RHHDDPDSAF
WGWNDIWLKP AFRHWSIEAE ISAIRCPLLA VQGLDDEYGT LAQIHGIARR AAQTELFELA
DCGHSPHRDQ PERLITAITA FIQQQPHGDK P