| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2939 |
|---|
| Symbol | |
|---|
| ID | 4686205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3094865 |
|---|
| End bp | 3095404 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639835946 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_983159 |
|---|
| Protein GI | 121605830 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.670984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATCG AATCGCCTTC ACGCCGCCAT GTTTTGCAAG CTTCCCTGAC CGTTGCCAGT
TCGGCGTTGT TCGCCAGGGC GGGCGCCCAA GGCCTGACAG GGCCGGCCTA CGAGGTCAGC
CCATGGCCGG GGCCGCTCAC CGCCTTCAGC CTGGTCGATA CCAGCGGCAA GACCTGGCGC
CCGGCCGACT TCAAGGGGCG GGCGGTGCTG CTCAACTTCT GGGCCAGCTG GTGCGAGCCA
TGCCGCGCTG AAATGCCCAC GCTGCAGCAG ATGGCGGACC TGTACGGCCC CGAGCAGCTT
CTGGTGCTGG CCATCAACTT CAAGGAAGCC CCGGCGCGGG CGCTGCAGTT TGCCAAACGC
ACCGGCATCA CCCTGCCGGT GCTGCTCGAT GTCGATGGCC AGGCGGCCCG GCGCTGGGGC
GTCAAGGTGT TTCCGACCAC GCTGGCCATC GACCGCCATG GCCAGCCGCG CCTGCGGGTG
CAGGGCGAGA TGGACTGGAC CGGAAAAGCG GCCGAGAAGC TGATTGCCAG CCTGTTGTAG
|
|---|
| Protein sequence | MPIESPSRRH VLQASLTVAS SALFARAGAQ GLTGPAYEVS PWPGPLTAFS LVDTSGKTWR
PADFKGRAVL LNFWASWCEP CRAEMPTLQQ MADLYGPEQL LVLAINFKEA PARALQFAKR
TGITLPVLLD VDGQAARRWG VKVFPTTLAI DRHGQPRLRV QGEMDWTGKA AEKLIASLL
|
|---|
| |