Gene Pnap_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2928 
Symbol 
ID4689578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3084902 
End bp3085816 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID639835935 
Productpirin domain-containing protein 
Protein accessionYP_983148 
Protein GI121605819 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG AACTCAAGCT GACCGGACAC GACAAGGATC TTGGCGGCGG CTTCATGGTG 
AGCCGCCTGC TGCCAGCGGC AACGCGCCAG TCGGTCGGCC CATTTATATT TTTCGACCAT
TTCGGCCCGT TCACGGTGCA AGCCGACGCC AATCATGACG TGCGGCCGCA TCCGCACATC
GGGCTGGCGA CGGTGACCTA CCTGTTTGAA GGCGCCATGC TGCACCGCGA CAGCCTGGGC
TCGGTCCAGC GCATCGAACC CGGCGCGATC AACTGGATGA CGGCCGGGCG CGGCATCGTG
CATTCCGAGC GCGCGCCGGA TGACCTGCGG GGCAAGGTTT ACCAGCAGCA TGGCCTGCAG
CTGTGGGCCG CCCTGCCCAA GATTCATGAA GAGGCGGAGC CCGACTTCGT GCACACGCCG
GCTGCGGCTA TTCCGGTCGT GCCGCTAGGC GCGTCCGAGC TGCGGGTGCT GATTGGCGAG
GCTTTCGGGC ACACCTCGCC CGTCAGAACC TTCTCGAAAA CCGTTTACCT CGACATCCGC
CTGGCCGCCG GCGAGCGCAT TGATTTGCCG CCGCTGGCCG ATGAGCTGGC GCTTTACGGG
GTGGATGGCG ACCTGCAGGT CGATGGCGAA GCGGTAGCGG CGCGCACCCT GGCCGTTCTG
GCGCCTGGCG CGGTGACGCA GATCAGCGCG AACGCGCCAG CACGTTTCGT GGTGATTGGC
GGCGACAAGC TCGATGGAAA GCGCTTCATC TGGTGGAATT TTGTCTCCAG CAGCAAGGAG
CGCATTGCCC AGGCCGGCGA TGACTGGGCC GCGCAAAGGA TGGGGCAGAT TGCCGGCGAT
GCCGAATTCA TTCCCCTGCC GGAGCGCAAG CCGGCGCTGG CGGAACCTGC AGCGCCCAAA
GCGCCTTACC TGTGA
 
Protein sequence
MTLELKLTGH DKDLGGGFMV SRLLPAATRQ SVGPFIFFDH FGPFTVQADA NHDVRPHPHI 
GLATVTYLFE GAMLHRDSLG SVQRIEPGAI NWMTAGRGIV HSERAPDDLR GKVYQQHGLQ
LWAALPKIHE EAEPDFVHTP AAAIPVVPLG ASELRVLIGE AFGHTSPVRT FSKTVYLDIR
LAAGERIDLP PLADELALYG VDGDLQVDGE AVAARTLAVL APGAVTQISA NAPARFVVIG
GDKLDGKRFI WWNFVSSSKE RIAQAGDDWA AQRMGQIAGD AEFIPLPERK PALAEPAAPK
APYL