Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2928 |
Symbol | |
ID | 4689578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3084902 |
End bp | 3085816 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835935 |
Product | pirin domain-containing protein |
Protein accession | YP_983148 |
Protein GI | 121605819 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG AACTCAAGCT GACCGGACAC GACAAGGATC TTGGCGGCGG CTTCATGGTG AGCCGCCTGC TGCCAGCGGC AACGCGCCAG TCGGTCGGCC CATTTATATT TTTCGACCAT TTCGGCCCGT TCACGGTGCA AGCCGACGCC AATCATGACG TGCGGCCGCA TCCGCACATC GGGCTGGCGA CGGTGACCTA CCTGTTTGAA GGCGCCATGC TGCACCGCGA CAGCCTGGGC TCGGTCCAGC GCATCGAACC CGGCGCGATC AACTGGATGA CGGCCGGGCG CGGCATCGTG CATTCCGAGC GCGCGCCGGA TGACCTGCGG GGCAAGGTTT ACCAGCAGCA TGGCCTGCAG CTGTGGGCCG CCCTGCCCAA GATTCATGAA GAGGCGGAGC CCGACTTCGT GCACACGCCG GCTGCGGCTA TTCCGGTCGT GCCGCTAGGC GCGTCCGAGC TGCGGGTGCT GATTGGCGAG GCTTTCGGGC ACACCTCGCC CGTCAGAACC TTCTCGAAAA CCGTTTACCT CGACATCCGC CTGGCCGCCG GCGAGCGCAT TGATTTGCCG CCGCTGGCCG ATGAGCTGGC GCTTTACGGG GTGGATGGCG ACCTGCAGGT CGATGGCGAA GCGGTAGCGG CGCGCACCCT GGCCGTTCTG GCGCCTGGCG CGGTGACGCA GATCAGCGCG AACGCGCCAG CACGTTTCGT GGTGATTGGC GGCGACAAGC TCGATGGAAA GCGCTTCATC TGGTGGAATT TTGTCTCCAG CAGCAAGGAG CGCATTGCCC AGGCCGGCGA TGACTGGGCC GCGCAAAGGA TGGGGCAGAT TGCCGGCGAT GCCGAATTCA TTCCCCTGCC GGAGCGCAAG CCGGCGCTGG CGGAACCTGC AGCGCCCAAA GCGCCTTACC TGTGA
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Protein sequence | MTLELKLTGH DKDLGGGFMV SRLLPAATRQ SVGPFIFFDH FGPFTVQADA NHDVRPHPHI GLATVTYLFE GAMLHRDSLG SVQRIEPGAI NWMTAGRGIV HSERAPDDLR GKVYQQHGLQ LWAALPKIHE EAEPDFVHTP AAAIPVVPLG ASELRVLIGE AFGHTSPVRT FSKTVYLDIR LAAGERIDLP PLADELALYG VDGDLQVDGE AVAARTLAVL APGAVTQISA NAPARFVVIG GDKLDGKRFI WWNFVSSSKE RIAQAGDDWA AQRMGQIAGD AEFIPLPERK PALAEPAAPK APYL
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