Gene Pnap_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2927 
Symbol 
ID4689000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3083587 
End bp3084900 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content65% 
IMG OID639835934 
Producthypothetical protein 
Protein accessionYP_983147 
Protein GI121605818 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCAC TCCACAACGC TTTTATCGAC GCTCAACCGG CCTCGCAGCT GGCTCAGCGC 
TTCCAGGCGG TTCGGGCGCA AACCGAGCGT CTGATTGAAC CGCTGAGCGC CGAAGACTGC
CAGTTGCAGT CCATGCCCGA CGCCAGCCCG GCCAAGTGGC ACCTGGCGCA TGTCACCTGG
TTTTTCGAAA CCTTCGTGCT GGAGCGCTTC GAGCCGGGCT TCAAGCCTTT CGATGCTGGT
TTCCGGGTGC TGTTCAACAG CTATTACAAC GGCGTGGGCG ACAAGTACCC GCGCCCCAGG
CGGGGCCTGA TCAGCCGCCC GTCGCTGCCC GAAGTGCTGG ACTACCGGCG CCAGGTCAAT
GCGCGCGTGC TGGATGTTAT TGCCAGGACC GACGAGGCCG ACCGCATGCA ACTGGCGCAG
CTCATCACGC TCGGGCTGCA GCACGAGCAG CAACACCAGG AGCTGCTGCT GACCGACATC
CAGCATGCCC TGTCGTTCAA CCCGCAGTGC CCTGCGTATG CCGGGCGCTG GCCGCTGGCC
AGCACGGCGC CCCAGCCGGT GCGCTGGCAT GCTTACGGCG GCGGCCTGGT GCAACATGGT
TTCGACGCCG GCCTGGATGG CGATTTTGCG TTTGACAATG AAACGCCGCG CCACCCGGCG
TATGTCGCCC CCTTCGAGCT GGCCAGCCGG CTGCTCACCA ACGGCGAGAT GCTCGGATTC
ATTGCGGACG GGGGCTACCG GCGGCCCGAG TTGTGGCTGT CCATGGGCTG GGACTGGGTG
CAGGCCGGCC AGCATGAGCT GCCGCTGTAC TGGCAGGGCG AAGCGGAAAA TTACCGCCAT
TTCACGCTGC AGGGGCTGCA GGACGTTGAC CCGAACACCC CCGCCTGCCA CCTCAGCTAT
TTTGAAGCCG ATGCGCTGGC GCGGTGGGCC GGAGCGCGGC TGCCGACCGA GTTTGAATGG
GAACTGGCGG CGCGCCTGTT GCCCGCGTCA GGCGCAAGGC CGGGAAATTT TGTCGAAACC
GGGGCTTTTC ATCCCCTGCC GCAACAGCAG GCCAGTGTTG ACGCGCCAGC GCAACTGCTG
GGCGACGCGT GGGAATGGAC GCAGTCCAAC TACAACCCCT ACCCCGGCTA CCGGCCGTGG
GAGGGCCTGG TCGGCGAATA CAACGGCAAG TTCATGTGCA ACCAGTTTGT GCTGCGCGGC
GGCTCCTGCG CCACGCCGCA AGGCCATGTC CGCGCCAGCT ACCGCAACTT TTTCCCGCCG
GACGCGCAGT GGCAGTTCAG CGGCGTGCGG CTGGCGCGCG ATATTCAAGG CTAG
 
Protein sequence
MLSLHNAFID AQPASQLAQR FQAVRAQTER LIEPLSAEDC QLQSMPDASP AKWHLAHVTW 
FFETFVLERF EPGFKPFDAG FRVLFNSYYN GVGDKYPRPR RGLISRPSLP EVLDYRRQVN
ARVLDVIART DEADRMQLAQ LITLGLQHEQ QHQELLLTDI QHALSFNPQC PAYAGRWPLA
STAPQPVRWH AYGGGLVQHG FDAGLDGDFA FDNETPRHPA YVAPFELASR LLTNGEMLGF
IADGGYRRPE LWLSMGWDWV QAGQHELPLY WQGEAENYRH FTLQGLQDVD PNTPACHLSY
FEADALARWA GARLPTEFEW ELAARLLPAS GARPGNFVET GAFHPLPQQQ ASVDAPAQLL
GDAWEWTQSN YNPYPGYRPW EGLVGEYNGK FMCNQFVLRG GSCATPQGHV RASYRNFFPP
DAQWQFSGVR LARDIQG