Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2927 |
Symbol | |
ID | 4689000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3083587 |
End bp | 3084900 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835934 |
Product | hypothetical protein |
Protein accession | YP_983147 |
Protein GI | 121605818 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTCAC TCCACAACGC TTTTATCGAC GCTCAACCGG CCTCGCAGCT GGCTCAGCGC TTCCAGGCGG TTCGGGCGCA AACCGAGCGT CTGATTGAAC CGCTGAGCGC CGAAGACTGC CAGTTGCAGT CCATGCCCGA CGCCAGCCCG GCCAAGTGGC ACCTGGCGCA TGTCACCTGG TTTTTCGAAA CCTTCGTGCT GGAGCGCTTC GAGCCGGGCT TCAAGCCTTT CGATGCTGGT TTCCGGGTGC TGTTCAACAG CTATTACAAC GGCGTGGGCG ACAAGTACCC GCGCCCCAGG CGGGGCCTGA TCAGCCGCCC GTCGCTGCCC GAAGTGCTGG ACTACCGGCG CCAGGTCAAT GCGCGCGTGC TGGATGTTAT TGCCAGGACC GACGAGGCCG ACCGCATGCA ACTGGCGCAG CTCATCACGC TCGGGCTGCA GCACGAGCAG CAACACCAGG AGCTGCTGCT GACCGACATC CAGCATGCCC TGTCGTTCAA CCCGCAGTGC CCTGCGTATG CCGGGCGCTG GCCGCTGGCC AGCACGGCGC CCCAGCCGGT GCGCTGGCAT GCTTACGGCG GCGGCCTGGT GCAACATGGT TTCGACGCCG GCCTGGATGG CGATTTTGCG TTTGACAATG AAACGCCGCG CCACCCGGCG TATGTCGCCC CCTTCGAGCT GGCCAGCCGG CTGCTCACCA ACGGCGAGAT GCTCGGATTC ATTGCGGACG GGGGCTACCG GCGGCCCGAG TTGTGGCTGT CCATGGGCTG GGACTGGGTG CAGGCCGGCC AGCATGAGCT GCCGCTGTAC TGGCAGGGCG AAGCGGAAAA TTACCGCCAT TTCACGCTGC AGGGGCTGCA GGACGTTGAC CCGAACACCC CCGCCTGCCA CCTCAGCTAT TTTGAAGCCG ATGCGCTGGC GCGGTGGGCC GGAGCGCGGC TGCCGACCGA GTTTGAATGG GAACTGGCGG CGCGCCTGTT GCCCGCGTCA GGCGCAAGGC CGGGAAATTT TGTCGAAACC GGGGCTTTTC ATCCCCTGCC GCAACAGCAG GCCAGTGTTG ACGCGCCAGC GCAACTGCTG GGCGACGCGT GGGAATGGAC GCAGTCCAAC TACAACCCCT ACCCCGGCTA CCGGCCGTGG GAGGGCCTGG TCGGCGAATA CAACGGCAAG TTCATGTGCA ACCAGTTTGT GCTGCGCGGC GGCTCCTGCG CCACGCCGCA AGGCCATGTC CGCGCCAGCT ACCGCAACTT TTTCCCGCCG GACGCGCAGT GGCAGTTCAG CGGCGTGCGG CTGGCGCGCG ATATTCAAGG CTAG
|
Protein sequence | MLSLHNAFID AQPASQLAQR FQAVRAQTER LIEPLSAEDC QLQSMPDASP AKWHLAHVTW FFETFVLERF EPGFKPFDAG FRVLFNSYYN GVGDKYPRPR RGLISRPSLP EVLDYRRQVN ARVLDVIART DEADRMQLAQ LITLGLQHEQ QHQELLLTDI QHALSFNPQC PAYAGRWPLA STAPQPVRWH AYGGGLVQHG FDAGLDGDFA FDNETPRHPA YVAPFELASR LLTNGEMLGF IADGGYRRPE LWLSMGWDWV QAGQHELPLY WQGEAENYRH FTLQGLQDVD PNTPACHLSY FEADALARWA GARLPTEFEW ELAARLLPAS GARPGNFVET GAFHPLPQQQ ASVDAPAQLL GDAWEWTQSN YNPYPGYRPW EGLVGEYNGK FMCNQFVLRG GSCATPQGHV RASYRNFFPP DAQWQFSGVR LARDIQG
|
| |