| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2921 |
|---|
| Symbol | |
|---|
| ID | 4688936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3076196 |
|---|
| End bp | 3076651 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639835928 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_983141 |
|---|
| Protein GI | 121605812 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.423523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.904701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGAGCG TGGGGGCAAT ACCTCGGAGC GTGGGGGCAA TCTTCCAGTG GCCAGTGCGT
GTTTACTGGG AAGACACCGA CGCCGGCGGC ATCGTGTTTT ATGCCAACTA CCTCAAGTTT
TTTGAACGCT CGCGCACCGA ATGGCTCAGA TCACTGGGCA TTGGACAGCA GCAATTGAAG
GACAGCACCG GATGCATGTT TGTAGTGACT GAAACGGCGA TCCGCTACCA CCGCCCTGCC
CGCCTGGACG ATGAGCTGAT CGTGACCGCC AGCATGATAG AAACCGGCCG TGCGTCCTTG
ATAGTCAAGC ACAAGGCGCT ATTAAAAACA GAGCAACCTG GTGAGCATCC GGCAACCTTG
CTCTGCGAAG GCACGATACG CATCGGCTGG GTTCACGGCG CCAGCCTGCA GCCCAGGCGC
ATACCCGCTT CCATTCTGGA CAGCCTGAAA ACCTGA
|
|---|
| Protein sequence | MGSVGAIPRS VGAIFQWPVR VYWEDTDAGG IVFYANYLKF FERSRTEWLR SLGIGQQQLK
DSTGCMFVVT ETAIRYHRPA RLDDELIVTA SMIETGRASL IVKHKALLKT EQPGEHPATL
LCEGTIRIGW VHGASLQPRR IPASILDSLK T
|
|---|
| |