Gene Pnap_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2919 
SymbolnusB 
ID4688205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3074319 
End bp3074840 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID639835926 
Producttranscription antitermination protein NusB 
Protein accessionYP_983139 
Protein GI121605810 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.355072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CCTTCATCAA AACCAAGCGT CCCCCGCAAA TCCGCACCGG CCTGACCGAT 
ACCGGCGTGA AAAAGGCAGC CGACAAATCG GCCCGCACCC GCGCGCGCGA GTTTGCATTG
CAGGCCCTGT ACCAGCATCT GGTCGGGCAG AACGGAGCCG ACTCGATTGA CGCCTTTACC
CGCGACCTGG TGGGTTTCCA CAAGGCGGAT TCGGCCCATT ACGATGCCTT GCTGCACGGC
TGCATCGAAT CGGAAAAAGC ACTCGATGAA AATATCACTC CCTTGCTTGA CCGAAAAATG
GCCGAGATTT CCCCGGTGGA ACATGCCATC CTGTGGATTG GTGCCTACGA ATTCACGAAT
TGCCTGGACG TGCCCTACCG CGTCGTGATC AACGAATGCA TTGAACTGGC CAAGGCGTTT
GGCGGCACTG ACGGCCACAA ATACGTCAAC GGCGTCTTGC ACAAGATGGC GCCTTCGCTG
CGCGCCTCGG AAGTAGCAGC CGACCAGTCG CGCCAGGCTT GA
 
Protein sequence
MAEPFIKTKR PPQIRTGLTD TGVKKAADKS ARTRAREFAL QALYQHLVGQ NGADSIDAFT 
RDLVGFHKAD SAHYDALLHG CIESEKALDE NITPLLDRKM AEISPVEHAI LWIGAYEFTN
CLDVPYRVVI NECIELAKAF GGTDGHKYVN GVLHKMAPSL RASEVAADQS RQA