| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2911 |
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| Symbol | |
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| ID | 4690102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3065238 |
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| End bp | 3066065 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639835918 |
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| Product | Tfp pilus assembly protein PilW-like protein |
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| Protein accession | YP_983131 |
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| Protein GI | 121605802 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.364706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0141201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACC ATAAGCGCAC CCGCCACAGT AAAAGGTTTC AACGCGGCTT CTCGCTGATG
GAGTTGATGG TCGGCCTGAC CATTGGTCTG CTGGTGGTAG TGGCAGCCCT CGGCAGTTTT
CTGTATACGC AAATCAGCTC TGGTGTGGTG GGTGACAGCG CTCGGCTGCA ACAAGAAGCA
GACAACACAT TTCGCATCTT GGGTTTTCAG ATCCAGCAGG CCGGTGCAAT CAACTTGGGA
CAAAGCACAA CTGACCCGGA TAGAGTGATC TTCAGCAGCG CGTTCACGGG GTTCGATCCC
ACGACCACAG GCGCAACAGC GGGCCAAATT TTTTCCATTC ATGGCTTAGA GGGTGCGAGC
AACGCCCCAG ACACGCTCCG CGTGAGTTAT CAAGACGGCA ACGGTACCAC GCATGATTGC
CTAGGCAACA CGCTCCTAAC AAGCAACACA TGGAACAACG CACGACGCAA TATTCGTATG
GACAACCAGT TTACTGTGGA CACCGCAAAA AAAGAGTTGA ATTGCGCGGG TGCCACTGCT
GCGGGGGCAC AGCCGATTGC CGATGGCGTT GAAGACTTTC AAGTCACTTA CGGCGTCCAG
ACTGTTGCTG GGGGCGTACT GCAATACCAG TTTTACACAG CTGATCTTGT CCCTGACTGG
ACCAATATTC AGGCAGTGAC TGTTTGCCTT CAGTTTATTG GTGAAAACCG AGGCAATCCG
CAGCCCGGCC TGGTTGTCAC TGGTTGTCGC GGTCAGACAG TCACCAACGA TGGCTTGCTA
CGCAAGGTAT TCCGGCGCAC ATACAGCCTA CGCAATGCTC TTTTATAA
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| Protein sequence | MYNHKRTRHS KRFQRGFSLM ELMVGLTIGL LVVVAALGSF LYTQISSGVV GDSARLQQEA
DNTFRILGFQ IQQAGAINLG QSTTDPDRVI FSSAFTGFDP TTTGATAGQI FSIHGLEGAS
NAPDTLRVSY QDGNGTTHDC LGNTLLTSNT WNNARRNIRM DNQFTVDTAK KELNCAGATA
AGAQPIADGV EDFQVTYGVQ TVAGGVLQYQ FYTADLVPDW TNIQAVTVCL QFIGENRGNP
QPGLVVTGCR GQTVTNDGLL RKVFRRTYSL RNALL
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