Gene Pnap_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2910 
Symbol 
ID4690097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3064673 
End bp3065251 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content55% 
IMG OID639835917 
Producttype IV pilus modification protein PilV 
Protein accessionYP_983130 
Protein GI121605801 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.389723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0418103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAA AGCAAGACAC GCGCAGCGTG TGCAGCGGCG CCAGCCAATC CCGTCAACGC 
GGCCTGAGTC TGATTGAGGC CATGGTTTCA ATAGTTATAT TGGCCTTGGG CATGATGAGT
TTGGCCGGTG TGCAAGCCCG TTTATTGGTC GAATCGCGCA CTACAAATTC ACGCGCCATT
GCGGTTGGCC TCATTGAGGA TCTCACCAAC CGCATGCTGC TCAATCGTGA CGCGGCACTG
GCCAACCGCT ACGCTTTGGC ATGGAGCGCG ACCAAAACAG TGCAGGACTG CACGCTCGCA
CAATGCACCG GCGCGCAACT GGCGCAATCA GACTTAAACA CTTGGCGTAA TGCTGTGCTT
GCTAGCCTGC CATCCGCCAA TGCAACCGTT TTTCAATCGC CAAATGATTC GCGCCAAATT
GGCATTGCCA TTGGGTGGAC GGCTAACGAA AGCAAAGCGG AAGGTACGAC AACTTCAGAA
AAAGCTGCCT ACAAGGCCCC GTTTGCCGTC ACTGCCGGTG CCAATGGCGT GGAGTGCCCC
GCAAACCTCA TCTGTCATCT AGTGTATGTA CAACCATAA
 
Protein sequence
MQLKQDTRSV CSGASQSRQR GLSLIEAMVS IVILALGMMS LAGVQARLLV ESRTTNSRAI 
AVGLIEDLTN RMLLNRDAAL ANRYALAWSA TKTVQDCTLA QCTGAQLAQS DLNTWRNAVL
ASLPSANATV FQSPNDSRQI GIAIGWTANE SKAEGTTTSE KAAYKAPFAV TAGANGVECP
ANLICHLVYV QP