Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2910 |
Symbol | |
ID | 4690097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3064673 |
End bp | 3065251 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639835917 |
Product | type IV pilus modification protein PilV |
Protein accession | YP_983130 |
Protein GI | 121605801 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.389723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0418103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTAA AGCAAGACAC GCGCAGCGTG TGCAGCGGCG CCAGCCAATC CCGTCAACGC GGCCTGAGTC TGATTGAGGC CATGGTTTCA ATAGTTATAT TGGCCTTGGG CATGATGAGT TTGGCCGGTG TGCAAGCCCG TTTATTGGTC GAATCGCGCA CTACAAATTC ACGCGCCATT GCGGTTGGCC TCATTGAGGA TCTCACCAAC CGCATGCTGC TCAATCGTGA CGCGGCACTG GCCAACCGCT ACGCTTTGGC ATGGAGCGCG ACCAAAACAG TGCAGGACTG CACGCTCGCA CAATGCACCG GCGCGCAACT GGCGCAATCA GACTTAAACA CTTGGCGTAA TGCTGTGCTT GCTAGCCTGC CATCCGCCAA TGCAACCGTT TTTCAATCGC CAAATGATTC GCGCCAAATT GGCATTGCCA TTGGGTGGAC GGCTAACGAA AGCAAAGCGG AAGGTACGAC AACTTCAGAA AAAGCTGCCT ACAAGGCCCC GTTTGCCGTC ACTGCCGGTG CCAATGGCGT GGAGTGCCCC GCAAACCTCA TCTGTCATCT AGTGTATGTA CAACCATAA
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Protein sequence | MQLKQDTRSV CSGASQSRQR GLSLIEAMVS IVILALGMMS LAGVQARLLV ESRTTNSRAI AVGLIEDLTN RMLLNRDAAL ANRYALAWSA TKTVQDCTLA QCTGAQLAQS DLNTWRNAVL ASLPSANATV FQSPNDSRQI GIAIGWTANE SKAEGTTTSE KAAYKAPFAV TAGANGVECP ANLICHLVYV QP
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