Gene Pnap_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2900 
Symbol 
ID4689997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3050231 
End bp3050704 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID639835907 
Producttransposase 
Protein accessionYP_983120 
Protein GI121605791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.020589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATT ACAAAGTCAC GTTATCCGAG CCAGAAAGAG CCGAGCTGCA GGGCATTGCA 
GGCAAAGGCA CCCACGCAGC GTCCAAAGTC ATCAATGCCT TGATACTGCT CAACTGTGAC
CAATCAGGAG GGCGAACCGA ACGCGCTCGC ACGTGTGACA TCGCAACCAT GCTGTGCGTG
AGTGAGCGCA AGGTGGACCG CATCAAGAAG AAGTTTGTCC TCGAAGGCCT GGACCTCACG
CTGAACCGCC AGCCCTCCAG GTGCGAGTAC GACCTGAAGA TCGATGGCCG CCTGGAGGCG
CAGCTGCTGG CGCTGAGTTG CTCGGCGCCG CCCGAAGGCC AGGCCCGCTG GTCGCTACGG
CTGCTGGCTG ACCGGCTGGT CGAACTGGAA TATATCGACA CCGTGTCCCA TGAGACGGTG
CGGCGGGCTC TCAAAAAAAC GAACTCAAAC CCTGGAGGAA AGTCGGCTGG GTGA
 
Protein sequence
MEHYKVTLSE PERAELQGIA GKGTHAASKV INALILLNCD QSGGRTERAR TCDIATMLCV 
SERKVDRIKK KFVLEGLDLT LNRQPSRCEY DLKIDGRLEA QLLALSCSAP PEGQARWSLR
LLADRLVELE YIDTVSHETV RRALKKTNSN PGGKSAG