| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2885 |
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| Symbol | |
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| ID | 4686570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3032674 |
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| End bp | 3034161 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835891 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_983105 |
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| Protein GI | 121605776 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.183945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.24109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA CCCCACTTTC CCCCCGTTTC CAGCTTGCAG CCGTCGCCGC TGCGGCGCTG
CTGGCCGGCT GCTCGATGAT TCCGACCTAC GAGCGGCCGG CAGCGCCCGT CGCGGCCGAC
TGGCCCGCGC TGAGCGCCAC GGCTGCCTTG TCCGGAACCT CCGGGACGGC GAACCAGGGC
ATCGCCGCCG CAGACATCGA GTGGCAGAGC TTTTTCAGTG ACCCCCGGCT GCGCCAGCTG
ATCGACGCTT CGCTGCGCAA CAACCGCGAC CTGCGCATCG CGGTGCTCAA CATCGAGCAG
GCCCGGGCGC AGTTCCAGAT TCGCCGCGCC GACCAGTACC CGACGGTCAA CGCGGCCGCG
ACCGGCTCGC GCCAGCCGTC CAGCAGTGGC GACAGCATCA CCAGCACGTA CACCGCCGGC
CTGGCGATGA CTTCCTACGA GTTCGACTTT TTCGGCCGCG TCGCCAGCCT GAAGGAGGCC
GCGCTGGCCC AGTACCTGGC CACCGAGGAG GGACGCAAGA CCACGCAGAT CAGCCTGGTA
GCGGCCGTGG CCAACACCTA CCTCAGCCTG CTGGCCGACG AGGAGCTGAT TGCCATCACC
CGGCAGACGC TGGCCACGCG CGAGGACTCG TTTCGCCTGA GCAAGCTGCG CTTTGACAAT
GGCGTGAGTT CGGAGCTGGA CGTGCGCCAG GCCGAGTCGC TGATTGAAGC GGCGCGTGTC
TCGCTGGCGC AGCTGATTCG CCAGCGCGCG CTGGACCAGA ACGCGCTGGT GCTGCTGCTG
GGCCAGCCGG CCACCGGCGA GCTGGCCGTG GCGCTGCCGG CCGGCAAGGG GCTGGCCGAC
ATGCCGATGA TGGTCGATGT GCCGGCGGGC TTGCCGTCCG ATTTGCTGAC GCGCCGCCCC
GACGTGCGCC AGGCCGAGCA ACTGCTGCTG GCGTCGAATG CCAACATTGG CGCGGCGCGG
GCGGCGTTCT TCCCGAAGAT TTCGCTCACC GCCAGCGCCG GCAGCGCCAG CTCGCACTTG
GGGGATTTGT TCAAGAGCGG CAGCTTTGGC TGGACGCTTG CGCCGCAGTT GCTGCTGCCG
ATTTTTGACG CGGGCCGCAA CCGCGCCGGA CTGGACTCGG CCAACGCCGG GCGCGACATT
GCCGTGGCGC AGTACGAAAA ATCGATACAG ACGGCATTTC GCGAAGTGGC CGATGCGCTG
GCCGGCCGCG CCACGCTGGG CGAGCAGTTG CGCGCGCAGC AGGCGCAGGC CAATGCCGAA
GGCGTGCGCT TCAAGCTGTC CGACCTGCGC TACCAGAACG GCATTGCCAG CCAGCTCGAC
CTGTTAGATG CGCAGCGTTC GCTGTTCACG GCGCAGCAGG CCGTGGTGCA GACCCGGCTG
GCGCAATTGC AAAGCCAGGT CACGCTGTAC AAGGTGCTGG GCGGCGGCTG GAAGGAGCCG
GGCGCGGTGG CGCAGGCGGT GAACGCTGCG CCTTCGCCAA AACCGTAA
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| Protein sequence | MNKTPLSPRF QLAAVAAAAL LAGCSMIPTY ERPAAPVAAD WPALSATAAL SGTSGTANQG
IAAADIEWQS FFSDPRLRQL IDASLRNNRD LRIAVLNIEQ ARAQFQIRRA DQYPTVNAAA
TGSRQPSSSG DSITSTYTAG LAMTSYEFDF FGRVASLKEA ALAQYLATEE GRKTTQISLV
AAVANTYLSL LADEELIAIT RQTLATREDS FRLSKLRFDN GVSSELDVRQ AESLIEAARV
SLAQLIRQRA LDQNALVLLL GQPATGELAV ALPAGKGLAD MPMMVDVPAG LPSDLLTRRP
DVRQAEQLLL ASNANIGAAR AAFFPKISLT ASAGSASSHL GDLFKSGSFG WTLAPQLLLP
IFDAGRNRAG LDSANAGRDI AVAQYEKSIQ TAFREVADAL AGRATLGEQL RAQQAQANAE
GVRFKLSDLR YQNGIASQLD LLDAQRSLFT AQQAVVQTRL AQLQSQVTLY KVLGGGWKEP
GAVAQAVNAA PSPKP
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