| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2882 |
|---|
| Symbol | fumC |
|---|
| ID | 4686683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3028690 |
|---|
| End bp | 3030081 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639835888 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_983102 |
|---|
| Protein GI | 121605773 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.405622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.452741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAC CCCACGCCAC GCGCACTGAG CGCGACACTT TCGGCCCCAT CGAAGTACCG
GCTGAGCGGC TCTGGGGCGC GCAAACCCAG CGTTCGCTGC AGAACTTCGA TATTTCAGGC
GAGCGCCAGC CGGTCGAGCT GATCCGGGCG CTGGCGCAGA TCAAGCGCTC CTCGGCGCTC
GTCAACCATG CGCTGGGCCT GCAGGATGAT CAAAAAACCA GCGCCATCGT GGCGGCGGCC
GATGAAGTCA TTGCCGGCCG GCATCCGGAC GAATTCCCGC TGGTGGTCTG GCAGACCGGC
TCGGGCACGC AGACCAACAT GAACGTCAAT GAAGTACTGG CGAACCGCGC CAGCGAATTG
CTGGGCGGCG AGCGCGGCGA TGCGCGCCTT GTCCATCCGA ATGACGACGT GAACCGCAGC
CAGTCGTCGA ACGATGTGTT TCCGACCGCC ATGCATGTGT CGGCGGTCGA TGGCATGACG
AACAGGCTGC TGCCGGCGAT TGAAAAACTG CGCGCCACGC TGGCGCAGAA ATCGCGCGAC
TTTGACGGCA TCGTGAAAAT CGGCCGTACC CACCTGCAGG ACGCGACGCC GCTGACGCTG
GGCCAGGAGT TTTCGGGCTA CGTGGCGCAA CTGGCGCACG GCGAGGCGCA TGTGCGCGCC
GCGCTGCCGC ACTTGTATGA ACTGGCGCTG GGCGGCACCG CCGTGGGAAC CGGGCTGAAT
GCGCCGAAAG GCTATGCCGA ACAGGTCGCG GCCGAACTGG CGCGGCTGAC CGGCTTGCCC
TTCGTCACGG CGCCGAACAA GTTCGAGGCC ATGGCTTCGT GCGACGCGCT GGTCCACGCC
CACGGCGCGC TGAAGACGCT GGCCGCCAGC TTGATGAAGA TTGCCAACGA TGTGCGCTGG
CTGGCCAGCG GTCCGCGCAG CGGCATCGGC GAGTTGAGCA TTCCCGAGAA CGAGCCGGGT
TCGTCGATCA TGCCGGGCAA GGTCAACCCG ACGCAAAGCG AGGCGCTGAC GATGCTGGCC
GCGCAGGTGT TCGGCAACGA TGTGGCGATC AATTTCGGCG GCGCGTCGGG TAACTTCGAA
CTCAATGTGT TCCGGCCGAT GATTGCCTGG AATTTTTTGC AAAGCGTGCG CCTGCTGGCC
GACGGCATGG TGAGCTTCAA TGACCACTGC GCCGTCGGCA TAGCACCCAA CCGCGAGCGC
ATCGCCGAAC TGGTCGGCCG TTCATTGATG CTGGTGACGG CGCTGAACCC GCACATCGGC
TACGACAAGG CGGCCTTCAT CGCCAAGAAG GCGCACAAGG AAGGCAGCAG CCTGCGCGAG
GCGGCGATTG CCTCGGGCCA TGTCACGGCC GAACAGTTCG ATGCCTGGGT GGTGCCGCAG
AACATGGTGT GA
|
|---|
| Protein sequence | MITPHATRTE RDTFGPIEVP AERLWGAQTQ RSLQNFDISG ERQPVELIRA LAQIKRSSAL
VNHALGLQDD QKTSAIVAAA DEVIAGRHPD EFPLVVWQTG SGTQTNMNVN EVLANRASEL
LGGERGDARL VHPNDDVNRS QSSNDVFPTA MHVSAVDGMT NRLLPAIEKL RATLAQKSRD
FDGIVKIGRT HLQDATPLTL GQEFSGYVAQ LAHGEAHVRA ALPHLYELAL GGTAVGTGLN
APKGYAEQVA AELARLTGLP FVTAPNKFEA MASCDALVHA HGALKTLAAS LMKIANDVRW
LASGPRSGIG ELSIPENEPG SSIMPGKVNP TQSEALTMLA AQVFGNDVAI NFGGASGNFE
LNVFRPMIAW NFLQSVRLLA DGMVSFNDHC AVGIAPNRER IAELVGRSLM LVTALNPHIG
YDKAAFIAKK AHKEGSSLRE AAIASGHVTA EQFDAWVVPQ NMV
|
|---|
| |