Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2875 |
Symbol | |
ID | 4686731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3018244 |
End bp | 3022029 |
Gene Length | 3786 bp |
Protein Length | 1261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835881 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_983095 |
Protein GI | 121605766 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.948484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC CCTGCCAGCA AACAGAGGCT TTGCACGCGG GCCTGGTGCC GCTGGATGCG GTTTTGTGTA CCGGGGAGCT GGCACGGCGT CCGGCTCGAC CGCCCGATTA CGAGACTGAA AACCGCGCGC TGGCGGTGCT GGTCCAGGCG CTGGCTGACT CGCCGCGCAC CATTCTCCAG GCACTGGCCG ACACCATTCT GGAGGTCTTC CAGGTGGGCT CGGCGGGCAT CAGCCTGCTG GCAAGTGACG AAAAGCGCTT CGTCTGGCCT GCGATTGCCG GCGCCTGGCA GGGCTATGCC GGCGGCGGCA CGCCGCGCGA TTTCAGCCCG TGTGGCGACG TGCTCGACCA CAACGCGCCG CTGCTGTTCA AACGCTTCGA ACGGCGCTAC GCCTATTTGC GGGACGCAAC GCATCAGGCC GAAGAATGCC TGCTGCTTCC TTTTTACGTG AAAGGCAAAG CGGTCGGCAC GATCTGGGCG GTGGCCCACG ATGCGCGCCG GCAGTTCGAC ACCGAGGATC TGCGCCAGCT GGCAAGCCTT GGCCGGTTTG CCTCGGCGGC CTACCAGGCG ACGATGTTGC TCGATACGGC GCTTGAGCAG GGCCAGGTCG CGCAGGGCCT GATGGACGAG GCGGTCCAGG CGCGTCTGGC CATGGGTAAG CTGCGCGAGA GTGAAGAGCA CTATCGCATG TGCTTTGAAT CCATCGAGGA AGGCTTTTGC ATCATCGAGA AGCTCGAAGG CGAAACGCTG GATTTTCGCT ACGTTGAAGC CAATGCGGCT TTCGCTGCGC AAACCAGTTT GCGCGATGTG GTCGGAAAGA CCCTCAGGCA GGTGTTGCCG GACGAATTCG AGGAACGGCT TGCCATTTAT GACACCGTTA CCCGAACCGG CCAGCCGATA AAGATTCAAC GTCGATTCGG CAGCCAAGGG CGTGTGCTGG AGCTTTACGC CTTTCGGGTC GAAGACGACA TGCACAGGCG CGTAGCCATC AACTTCCAGG ACATCACCGA GCGTAAAAGT GCCGAGGAGA AGCTGGCCCG GCAGGCTGCG GAACTGGCTA CCTTGTATGC CACCGCCCCG GTGGGCTTGT TCATGCTCGA CACCGACCTG CGCTATGTGC GGATCAACCA GGCCATGGCC GACCTCAACG GCCTTTCTGC AGAGCGGCAT ATCGGCCGGA CGCTGCGCGA ATTGTTGACG GCTGGCCTGG CCGACGCCGT TGAACCCCTG CTGCGCCAGG TTCTCGAAAC CGGCAGGCCG GAGCTGAACC GCGAGGTGCA TGGGGCCACC TTGCCCCGAT CCGGCGAGCA GCGCCACTGG CTGGTGAGTT ACCACCCGGT GCAGGCCGGG GATGGAACGA TCACAGGGGT GCATGGCGTG GTGCAGGAAA TCACCGAGCG CAAGCAGGCG GAAGATGCCT TGCGCGAATC GCAGCGGTTT TTGCATTCAA CCCTCAATGC CTTGTCGGGC CACATCGCCG TACTGGATGA ATTCGGAACG ATCCTGGAAA TCAACGAGGC ATGGAGCCGG TTCGCCCTTG AGAATCAAAC GGCAGGTGTG AATGCCAGCG TCGGTGTCGG CGTTAACTAT CTTCAGCATT GCGAACATTG CGAACATAAG TCTTTCCAAT GTGGTGATAC GTCGGCTTAT GCCGAGGCCA TTAAGGATGT CATTGCCGGA CGGCGAACGC GGTTTGAGAT GGAATATGCC TGCCATTCGC CAACGCAGCA GCGCTGGTTC GTCATGCGGG TCACCCGCTT CCAGAGTCCC GGGCCGGTGC GGATCGTCAT CGTTCACGAT GACTGCACGG AACGAAAGCT GGCCGAAAAC GCGTCTCGCG ACACCGAAGA ACGCTATCGC AATTTGTTCA ACTCCATGGA TGAAGGCTTT TGCCTCATCG AAATGATCTT CGATGGCCAG CAAAAGCCGG TTGATTACCG TTTCCTGGAA GTCAATCCTG CTTTTGAAAC GCAGACGGGA ATACGCAACG TGACGGGAAA ACGGGTGCGC GAAATAATGC CTGATCTTGA AGCGTACTGG TTTGAAATTT ACGGCAAGGT CGCGCTGACG GGCGAATCAC TGCGCTTTAT CAACGAAGTC AAGGCGCTGG ACCAGTGGTG GGATGTGCAT GCGACCCGGC TGGGTGGACC GGAAAACCGG CAAGTCGCCA TCATTTTCGA CAATGTCACC CAGCGAATGA AGGCCGACGA AGCCTTGCGC CAGAGCGAAG CGCGTTTTCG CTTGTTGTTT GACCGGGGGC CGGTCGCCAT CTATTCGTGC GATACCTCGG GAATGATCAA GGAATTCAAC CCCTGCGCCG TGAAACTATG GGGACGCGAA CCGACACCGG ACGATATTGA CGAGCGGTTC TGCGGCTCAT CCAGGGTGTA TTGCCTCGAC GGCACGCTAC TCACCCCCGA GCAAAACCCG GTGATTGCGG TGCTGAAGGG TGAAATGCTC CAGGCGCATG ACGTGGAAGC CTTGATCGAG CGGCCCGATG GCTCGCGAAT CCATGTGATT GCCAATATTG TTCCTCTCAG AAACAGCTGG GGCGAAATCA CCGGCGCCAT CAACTGCTTT TACGACATCA CCGAGCGCAG CCGCCTGGAG CAAAAGACGC AGGAGCAGGC GCAAGCCCTG GCCGAGCTGC ACCAGCGCAA GGATGAGTTC CTGGCGATGC TCAGCCATGA ATTGCGCAAC CCGCTCGCGC CCCTGGCCAG CGCCGTGCAA TTGCTGCAGC GCCAGAAGAA CGAAGCGCCG CAGCAGCAGG CCCTGAGCAT CATCGAGCGC CAGACCGGGC AACTCAAGCA CCTGGTGGAT GACCTGATGG AAATCTCCCG CATTACCAGC GGCAGTGTCC GGCTTCGCCA GGAGCGGGTC AGCCTGGGCG ATGTCGTGGA ACGGGCGCTG GAAACCACCC GGCCGCTGAT GCTGCAACGC CGCCATGAAC TCGCGGTGTC GCTGCCGCCA GAGCCGCTCT GGCTGCATGC CGACGCCACC CGGCTGGAGC AGGTGCTGGT GAACCTGCTC ACCAACGCCG CCAAGTACAC CGACAAGGGC GGGCGCATCT GGCTGAGCGC CGGGCAGGAG GAGGCCGCCG GGACAGGTGC GGCGGTGGTC CGGGTGCGCG ATACCGGCAT CGGCATCGCG CCTGAACTGT TGCCGCGCAT CTTCGATTTG TTCACGCAGG CAGAGCGCTC GATTGACCGA TCGCAAGGCG GTCTGGGCAT CGGCCTGTGC CTGGTGCGGC GGCTGCTGGA ATTGCACGGC GGAACCGTGG ATGTGCGCAG CGTCCTGGGG CAAGGCAGCG AATTCGTCGT GCGCCTGCCG GTCATGCCGG CTGACATGCC GCAGCCGTCC GTGCCGCCGC CTTCCGTCAA ACCGGCCCAG CCACCGGGCA ATGGCTGCCG GGTGCTGGCT GTCGATGACA ACGTGGACGC GGTCCAAAGC CTGGCGATGC TGCTGAAGAT GTCCGGGCAT GTGGTTGAAA TTGCCTACGA CGGCCCGAGC GCCCTGACCA TGGCCCTGGC CATGCGGCCC GACGTCATGC TGCTGGACAT CGGCTTGCCG GGACTCACCG GCTACGAGGT GGCCGAGCAG GTTCGCCAGC AACCTGCGCT CAAGAGTGTC GTGCTGGTCG CCCTGACGGG GTATGGACGC GCGGCGGACC GGCAGTTCTC GAAAGACGCG GGGTTTGACT ACCATCTGGT CAAGCCCGCC GAATTTCGCG AGGTCGAGAA AATCCTGTCG GTCGTCGCCG GGCAGGCCGC CTGGCCGGGC CGATAA
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Protein sequence | MTDPCQQTEA LHAGLVPLDA VLCTGELARR PARPPDYETE NRALAVLVQA LADSPRTILQ ALADTILEVF QVGSAGISLL ASDEKRFVWP AIAGAWQGYA GGGTPRDFSP CGDVLDHNAP LLFKRFERRY AYLRDATHQA EECLLLPFYV KGKAVGTIWA VAHDARRQFD TEDLRQLASL GRFASAAYQA TMLLDTALEQ GQVAQGLMDE AVQARLAMGK LRESEEHYRM CFESIEEGFC IIEKLEGETL DFRYVEANAA FAAQTSLRDV VGKTLRQVLP DEFEERLAIY DTVTRTGQPI KIQRRFGSQG RVLELYAFRV EDDMHRRVAI NFQDITERKS AEEKLARQAA ELATLYATAP VGLFMLDTDL RYVRINQAMA DLNGLSAERH IGRTLRELLT AGLADAVEPL LRQVLETGRP ELNREVHGAT LPRSGEQRHW LVSYHPVQAG DGTITGVHGV VQEITERKQA EDALRESQRF LHSTLNALSG HIAVLDEFGT ILEINEAWSR FALENQTAGV NASVGVGVNY LQHCEHCEHK SFQCGDTSAY AEAIKDVIAG RRTRFEMEYA CHSPTQQRWF VMRVTRFQSP GPVRIVIVHD DCTERKLAEN ASRDTEERYR NLFNSMDEGF CLIEMIFDGQ QKPVDYRFLE VNPAFETQTG IRNVTGKRVR EIMPDLEAYW FEIYGKVALT GESLRFINEV KALDQWWDVH ATRLGGPENR QVAIIFDNVT QRMKADEALR QSEARFRLLF DRGPVAIYSC DTSGMIKEFN PCAVKLWGRE PTPDDIDERF CGSSRVYCLD GTLLTPEQNP VIAVLKGEML QAHDVEALIE RPDGSRIHVI ANIVPLRNSW GEITGAINCF YDITERSRLE QKTQEQAQAL AELHQRKDEF LAMLSHELRN PLAPLASAVQ LLQRQKNEAP QQQALSIIER QTGQLKHLVD DLMEISRITS GSVRLRQERV SLGDVVERAL ETTRPLMLQR RHELAVSLPP EPLWLHADAT RLEQVLVNLL TNAAKYTDKG GRIWLSAGQE EAAGTGAAVV RVRDTGIGIA PELLPRIFDL FTQAERSIDR SQGGLGIGLC LVRRLLELHG GTVDVRSVLG QGSEFVVRLP VMPADMPQPS VPPPSVKPAQ PPGNGCRVLA VDDNVDAVQS LAMLLKMSGH VVEIAYDGPS ALTMALAMRP DVMLLDIGLP GLTGYEVAEQ VRQQPALKSV VLVALTGYGR AADRQFSKDA GFDYHLVKPA EFREVEKILS VVAGQAAWPG R
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