Gene Pnap_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2869 
Symbol 
ID4690176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3011364 
End bp3012326 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID639835875 
Producthypothetical protein 
Protein accessionYP_983089 
Protein GI121605760 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.2147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACACC GCCCTGCTTC CCCCTGGATT GCCTATGCCT GCCTGGCGCT GAGCATGTCG 
CTGGTGGGCA GTTATGTCGC CCTGTCCAAG CCGCTGGTGG CCGCGCTGCC GGTGTTTTTG
CTGGCCTGGC TGCGCTTTGG CATTGGCGGG CTGGCGATGG CGCACTGGCT GAAAAAGCCG
GCTCATGAAG CGCCAATGAG TTCGCAGACC CGCCGGCTGC TGTTCCTGGA GTCGTTCCTG
GGCAACTTCC TGTTTTCGAT CTGCATGCTG TTTGGCGTGA GCCTGACCAG CGCGGTGGCC
GCCGGCGTCA TCATGGCGGC CATTCCGGCC ACGGTGGCGC TGCTGAGCTG GCTGTTTCTG
CGCGAGCGCA TCAGCGCGCG GGTGTGGGCC GCCGTGGCCT GCGCGGTGCT CGGCATTGCT
CTCGTTTCGC TATCAAAAAA TGAGCTATCC ATGCATATGC GTAGTGCGCA AGAGGCCGAT
TTGGCTTCAA AAAATGCCTG GCTTGGCAAT CTGCTGCTGG TGGGCGCGGT GCTGTGCGAG
GCGGCGTATG CGGTGATCGG CAAGAAGCTG ACCGGCGTGC TCGGCCCCAA ACGCATCACC
GCCCTGATCA ACCTGTGGGG CTTTGCGCTG GTCACGCCGC TGGGGCTGTG GATGGCCTGG
GATTTTGACT TTGCCGGGGT GGCGCCGCCG ATCTGGCTGC TGCTGGTGTT TTATGCGCTG
GCCGCCAGCG TCTGGACGGT GTGGCTGTGG ATGACCGGCC TGAAAACCGT GCCCGCCAAC
CAGGCCGGCG TGTTCACCGT GATGCTGCCG GTCAGCGCGG CGGCGGTCGG CGTGCTGGTG
CTGGGCGAGC ACCTGAGCGG CACGCAAGTC GGCGCTTTTG CGATTGCGCT GACCGGCGTG
GTGCTGGCGA CGCTGCCAGA ACGCGGCAGA CCCAAGCCGG CACAGGCCGC GCCGCTGCGG
TGA
 
Protein sequence
MPHRPASPWI AYACLALSMS LVGSYVALSK PLVAALPVFL LAWLRFGIGG LAMAHWLKKP 
AHEAPMSSQT RRLLFLESFL GNFLFSICML FGVSLTSAVA AGVIMAAIPA TVALLSWLFL
RERISARVWA AVACAVLGIA LVSLSKNELS MHMRSAQEAD LASKNAWLGN LLLVGAVLCE
AAYAVIGKKL TGVLGPKRIT ALINLWGFAL VTPLGLWMAW DFDFAGVAPP IWLLLVFYAL
AASVWTVWLW MTGLKTVPAN QAGVFTVMLP VSAAAVGVLV LGEHLSGTQV GAFAIALTGV
VLATLPERGR PKPAQAAPLR