Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2866 |
Symbol | |
ID | 4686796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3008642 |
End bp | 3010120 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639835873 |
Product | GntR family transcriptional regulator |
Protein accession | YP_983087 |
Protein GI | 121605758 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.156549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.161976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCG AATTCCTGCT CTCCGAACTG TCCCGCCTGC GCGCCGCCAG CGAACTGCCG CTGCACCGGC AGCTGTACGA AGCGCTGCGG CGCGTCATGC TGGAGGGCTA TCTGCAGGCC GGTGAACGGC TGGCCTCCAG CCGCGACCTG GCACGCGGCC TGGGCCTGTC GCGCAACACC GTCATCACCG CGCTGAACCA GCTGACGGTC GAAGGCTACC TGGTCAGCCG CGTCGGCAGC GGCACCTATG TCAGCGACAA CTGCCCCAAG GCCGCCCCCA AGCCCCGCGC GCGGCTGGCC GCGCAGCGCC CGCACCTGTC GCGGCGCGGT GAAACCCTGA CCAGCTGCTA CACCGCCGAC CAGCTGGAGG TGCAGCCCTT CACCGCCGGC ATTCCCGACT TCAGCGCCTT TCCAGTGGCA CTGTGGCAGC GGCTGCAAAA CAAGCACTGG CGCATGAGCT ACCCCGAGAT GCTGGACTAC AGCGGCGCCG GCGGCCATGC CCCGCTGCGC CGGGCCGTCG CCGATTACCT GCGGGTGTTT CGCAGCGTGC AGCTCGATGC CGACCAGGTC ATCATCACCG CCGGCACGCA GCAGTCGATT GCCCTGTGCG CGCAGCTGCT GGCCGACCAT GGCGATACGC TGTGGATCGA AGACCCGGCC TACTGGGGCG CCATCAAGGC CCTGACGGCC GGCGGCCTCA AGCTGCATCC GGTGGCCGTC GATGGCGAAG GCATGGCACC CGGCGCCGCC GACGAAGCCG CGCCGCCCCG GCTGATCTAC GTCACGCCGT CGCACCAGTA CCCGACCGGC GCGGTCATGT CGCTGGCCCG GCGCCGGCTG CTGCTGGCCA CCGCCCGGCG GCACGGCGCC TGGATACTGG AGGACGACTA CGACAGCGAA TTCCGTTTCA GCGGCCCGCC GGTCTCGTCG CTGGCCGGCC TGGACAAGGA CGAGCGGGTG CTCTACATGG GCACGTTCTC CAAGGTGCTC TACCCCGGCC TGAAGCTGGG CTACCTGGTG GTGCCCAAGT CGCTCATCGG CCCATTCCGC CAGGCCCATT ACGACCTGAA CCGGCCCGGC CAGATGCCGC TGCAGGCTGC GCTGTCCGAG TTCATCGAGA TGGGACATTT CACGGCGGCG CTGCGCAAGT CGCGCGTGAG CTACGCGCTG CGGCGGCAAA GCCTGCTCGA AGGCCTCAAG CCCTGCCTGG GCGAGCACGC CTTCATCTCC GGCGCGGAAC AGGGGCTGCA TCTGTGCGTG CGCCTGCCGC CCACGCTCGA CGACCAGGCG CTGGCCCGCC GCATCGCCGA GCACGGCCTC TTGGTGCGCC CGCTGTCGGG CTACTGCCTG CAGCGGCGCG ACGCGCGCGG ACTGGTCATC GGCTACGGCT ACGCGCCCTT GGCCGGCATC ATGCAGGGCG CGCCGGTGCT GGCGCGGCTG ATCCAGGAGG AGATTCGGCG CTGGAAGGCC GGTTTTTAA
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Protein sequence | MLSEFLLSEL SRLRAASELP LHRQLYEALR RVMLEGYLQA GERLASSRDL ARGLGLSRNT VITALNQLTV EGYLVSRVGS GTYVSDNCPK AAPKPRARLA AQRPHLSRRG ETLTSCYTAD QLEVQPFTAG IPDFSAFPVA LWQRLQNKHW RMSYPEMLDY SGAGGHAPLR RAVADYLRVF RSVQLDADQV IITAGTQQSI ALCAQLLADH GDTLWIEDPA YWGAIKALTA GGLKLHPVAV DGEGMAPGAA DEAAPPRLIY VTPSHQYPTG AVMSLARRRL LLATARRHGA WILEDDYDSE FRFSGPPVSS LAGLDKDERV LYMGTFSKVL YPGLKLGYLV VPKSLIGPFR QAHYDLNRPG QMPLQAALSE FIEMGHFTAA LRKSRVSYAL RRQSLLEGLK PCLGEHAFIS GAEQGLHLCV RLPPTLDDQA LARRIAEHGL LVRPLSGYCL QRRDARGLVI GYGYAPLAGI MQGAPVLARL IQEEIRRWKA GF
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