| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2864 |
|---|
| Symbol | |
|---|
| ID | 4686815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3006230 |
|---|
| End bp | 3007609 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639835871 |
|---|
| Product | glutamate--ammonia ligase |
|---|
| Protein accession | YP_983085 |
|---|
| Protein GI | 121605756 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.317185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.149371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA ACATGAGCAT GAGCAAGGCA TCGACCTTCA CCGACCTTGA AAACTGGCTG
AACGAACGCA GGGTCACTGA AGTGGAATGC CTGGTGCCCG ACCTGACCGG CGTGGCCCGG
GGCAAGATTT TGCCGCGCGG CAAGTTCACC GAAGACCGGG GCATGCGCCT GCCCGAAGCG
GTGGTGGCCA TGGGCGTGAC CGGCGAGTTT CCCGAAAGCG GCCCGTATTA CGACGTCATC
AGCCCGACCG ACAAGGACAT GCATTTGCGG CCCGACCCGT CCACGGTGCG GATTGTTCCG
TGGGCCTCGA ACCCGACCGC GCAGGTCATC CACGACTGCT TTGATCCGGC CGGCAAGCTG
ATCCCTTTTG CGCCCCGCAG CGTGCTGCGC CGCGTCTGCG AGCTGTATGA AGCCGAAGGC
CTGGTGCCGG TGGTGGCGCC GGAGTTGGAG TTCTACCTGG TGGCCCGCAA CACCGACCCC
AACACCCTGC TGCGCCCGCC GATCGGCCGA AGCGGGCGGG CCGAAACCTC CCGGCAGGCC
TACAGCATTG ACGCGGTGAA CGAGTTCGAC CCGCTGTTCG AGGACATCTA CGACTACTGC
GAAAAGATGG AACTCAATGT CGATACCCTG ATTCACGAGG TCGGGGCGGG GCAGATGGAG
ATCAATTTTT TCCATGCCCA TCCGCTGGGT CTGGCCGACG AGGTGTTTTT CTTCAAGCGC
ACGGTGCGTG AAGCAGCCCT GCGCCACAAC ATGTATGCCA CCTTCATGGC CAAGCCGATT
GCCGGCGAGC CCGGCAGCGC GATGCATGTG CACCAGAGCA TCCTCAGCAA GGAAACCGGC
CTGAACATCT TCAGCAACCC GGATGGCAGC GAGTCGGAGG CTTTCTTTCA TTACATCGGT
GGCCTGCAGC GCTACATTCC GGCGGCCATG GCCCTGGTGG CGCCGTATGT CAACAGCTAC
CGGCGGCTGT CGCGCGACAC GGCGGCGCCC ATCAACATTG CCTGGGGCCA TGACAACCGC
ACGGTGGGCA TCCGCTCGCC GATTGCCACG CCGCAGGCCC GCCGGGTCGA AAACCGGGTG
ATCGGCGCCG ACGCCAATCC GTATGTGGCG CTGGCGATGA CGCTGGCCTG CGGCTACCTG
GGCATCAAGA ACAAGATCAA GCCCAAGCCG GAGATGAAGG GCGATGCCTA CCTGTCGCCG
TATTCGCTGC CGCGCAGCCT GGGTGAGGCG CTGGACTGGC TGCGGCGCGA ATCCGACCTG
CACGAGGTGC TGGGCCGCGA ATTTGTCACG GTGTATTCCG AGATCAAGGA AATGGAATTT
GCCGAGTTCA TGAAGGTGAT TTCGCCCTGG GAGCGTGAAC ACCTGCTGCT GCTGGTGTGA
|
|---|
| Protein sequence | MSFNMSMSKA STFTDLENWL NERRVTEVEC LVPDLTGVAR GKILPRGKFT EDRGMRLPEA
VVAMGVTGEF PESGPYYDVI SPTDKDMHLR PDPSTVRIVP WASNPTAQVI HDCFDPAGKL
IPFAPRSVLR RVCELYEAEG LVPVVAPELE FYLVARNTDP NTLLRPPIGR SGRAETSRQA
YSIDAVNEFD PLFEDIYDYC EKMELNVDTL IHEVGAGQME INFFHAHPLG LADEVFFFKR
TVREAALRHN MYATFMAKPI AGEPGSAMHV HQSILSKETG LNIFSNPDGS ESEAFFHYIG
GLQRYIPAAM ALVAPYVNSY RRLSRDTAAP INIAWGHDNR TVGIRSPIAT PQARRVENRV
IGADANPYVA LAMTLACGYL GIKNKIKPKP EMKGDAYLSP YSLPRSLGEA LDWLRRESDL
HEVLGREFVT VYSEIKEMEF AEFMKVISPW EREHLLLLV
|
|---|
| |