| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2861 |
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| Symbol | |
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| ID | 4686946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3002308 |
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| End bp | 3003408 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835868 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_983082 |
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| Protein GI | 121605753 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.527786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0270955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AGAATGCAAA AGACGGCTAT CTGGTTACCG AGAAACTGGT CAAGCGCTTT
GACGAAGCGC TGGCGGTGGA CGAGGTGTCG CTGTCGGTCG GCCGGGGCGA GATTTTTGCG
CTGCTGGGCA GTTCAGGCTG CGGCAAATCC ACCTTGCTGC GCATGCTGGC AGGCTTCGAA
AAACCCACCT CGGGCCGCAT CCTGCTGGGC GGCCAGGACG TGGCCGGCCT GCAGCCCTAC
GAGCGGCCGA TCAACATGAT GTTCCAGTCC TATGCCCTGT TTCCGCATCT CGACATCTGG
GAAAACATCG CCTTTGGCCT GAAGCGCGAA GGCTTGGCCA AGGCTGAAAT CCAGCAGCGC
GTGGGCGAAA TGCTCGACCT GGTGCAGCTC GGTCCCTATG CCAAACGCAA GCCACACCAG
CTTTCCGGAG GCCAGCAGCA GCGGGTGGCG CTGGCGCGCA GCCTGGCCAA GCGGCCCAAG
CTGCTGCTGC TTGATGAACC GCTGGGTGCG CTGGACAAGA AACTGCGCGA ACAGACCCAG
TTCGAGCTGG TCAACATCAT CGAAAAAGTC GGCGTGACCT GCGTCATGGT GACCCACGAC
CAGGAGGAGG CCATGACCAT GGCTGGCCGC ATCGCGGTCA TGAGCAAGGG CCGGGTGCTG
CAGGTCGGCA CGCCCGAAGA GGTGTATGAG CATCCGGCCA ACCGTTTCGT GGCGGACTTC
ATCGGCAATG TCAATATGTT CGAAGGGCGG CTCAGCGTGG ACGAGCCCGA CCGCTGCGCT
GCCGTCACCG GCATCGGCGA AATCCAGGTG GGCCATGGGG TCAGCGGTAC GCTGAACATG
CCGCTGGCGA TTGCCGTGCG GCCCGAGAAA ATCGAGATCA GCAAGCAGCG GCCGGCAGTT
AGCCGCAATG TCTTTGCCGG CAAGGTCCAG GAAATTGCCT ATTTCGGCTC CTATAACACC
TACATCGTGG TGGCCAGCGA CGGCTCTCGG GTCAGGATCA CCGAAGCCAA CACCTCGCGC
GAAGATATCA GCGGCATCAC CTGGGAAGAC AGCGTCTTTT TCTGGTGGGG CGACCGCGCC
GGTATTGTCC TGCGCGATTA A
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| Protein sequence | MADKNAKDGY LVTEKLVKRF DEALAVDEVS LSVGRGEIFA LLGSSGCGKS TLLRMLAGFE
KPTSGRILLG GQDVAGLQPY ERPINMMFQS YALFPHLDIW ENIAFGLKRE GLAKAEIQQR
VGEMLDLVQL GPYAKRKPHQ LSGGQQQRVA LARSLAKRPK LLLLDEPLGA LDKKLREQTQ
FELVNIIEKV GVTCVMVTHD QEEAMTMAGR IAVMSKGRVL QVGTPEEVYE HPANRFVADF
IGNVNMFEGR LSVDEPDRCA AVTGIGEIQV GHGVSGTLNM PLAIAVRPEK IEISKQRPAV
SRNVFAGKVQ EIAYFGSYNT YIVVASDGSR VRITEANTSR EDISGITWED SVFFWWGDRA
GIVLRD
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