Gene Pnap_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2853 
Symbol 
ID4687067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2994336 
End bp2994860 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content55% 
IMG OID639835861 
Producttranslation initiation factor IF-3 
Protein accessionYP_983075 
Protein GI121605746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0116753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCTG AAGTACGCCT GACCGGGCCG GACAACGAGC CTTTGGGCGT TGTCAGTCTC 
ATGGAGGCGT TGCGTCTGGC CGGTGAAGCT GATGTGGACT TGGTAGAGAT CTCGCCCACG
GCCGTGCCGC CAGTGTGCAG ACTCATGGAT TACGGAAAAT TCAAGTATGC CGAGCAGAAA
AAGGCGGCGG AAGCGAAGTC CAAGCAAAAA GTGATCGAGG TTAAGGAAAT CAAATTCCGT
CCCGGCACTG ATGATGGCGA CTACAACATC AAACTGCGCA ATATCAAGCG TTTTCTGGAT
GACGGCGACA AGTGCAAGAT TACCCTGCGC TTTCGTGGTC GGGAAATTAC TCACCAAGAG
CTTGGTCTGG CCTTGCTGGC GCGGATTCGT GACGAACTGG CCGATTTGAT CCTGGTAGAG
CAGTTTCCCA AGCTTGAAGG TCGTCAGATG GTCATGATGA TTGCGCCGGG CCGCAAAAAG
GTTGCGTCCA AAGCGACTGC AGAAGCTGCG CCAGCGTCTT CTTGA
 
Protein sequence
MAPEVRLTGP DNEPLGVVSL MEALRLAGEA DVDLVEISPT AVPPVCRLMD YGKFKYAEQK 
KAAEAKSKQK VIEVKEIKFR PGTDDGDYNI KLRNIKRFLD DGDKCKITLR FRGREITHQE
LGLALLARIR DELADLILVE QFPKLEGRQM VMMIAPGRKK VASKATAEAA PASS