| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2837 |
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| Symbol | |
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| ID | 4686935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2980651 |
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| End bp | 2981871 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639835845 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_983060 |
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| Protein GI | 121605731 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0025637 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTCA AGCTTTTTCT TTCGCGTCGC ATGGCCCTGG GCGGACTGGC GCTGTTGCTG
GTGGGTGCGC TGGCTTTTGT GGCGCTGCGA ACCGGACCGC TGGCGCCCAC GCGCGTCACC
GTTGCCGCTG TGCAGCAAGG CAAGCTGAGT CCGGCTCTCT TTGGCATCGG TACGGTGGAA
GCGCGGCGCA GCTGGATGGT CGGCCCCACG GTGGCGGGCC GGGTGCTGAG CGTGAAGGTG
GACGTGGGCG ATGCGGTCAA GGCTGGACAG TTGCTGGCCG AAATGGACCC CGTGGATCTG
GACCAGCGCC TGAGCGCCCT CGACGCTTCC CTGGCCCGCG CGCGCAGCAC GCAGGCGGCC
GCGCAGGCCC AGGTCCGCGA TGCCACGGCG CGGCGTGAAC TGGCCGCGAT GAACGCCCAA
CGCAACCAGG ACCTTGCCGC GCAAAACTTC ATCAGCGCCG GCGCGCTCGA AGCCCGACTG
CAGGAAAGGG CCTCGGCCGA TGCCGGGCTG CAGGCCGCGC AAGCCAACCT GGCGGGCGCG
GGCCAGGACG TCGCCCGGCA GCGGGCCGAA CGCGCCGCGC TGGCGCAGCA ACGCGGCAAC
GTGCGCCTGC TGGCCCCGGC CGACGGCGTG GTGACCAGCC GCGACGCCGA AGCCGGCAGC
ACCGTGGTGG CCGGCCAGCC GGTGCTGCGG CTGATCGACC CGGCCAGCCT GTGGGTCAGG
CTGCGCGTGG ACCAGGGCCG CTCCGCCGGG CTGGCGCCTG GCCTGAAAGC CCGCGTCGTG
CTGCGCTCGC AGCCGCGCAC GGCGCTGACC GGCCAGGTCG CGCGGGTGGA GCTGCTGGCC
GACAGCGTGA CCGAAGAGCG CATTGCGCAG GTGGCGTTTG ACGCCGCTGA CGGGACTACT
TCTGGGGCCT CGGTCGGTGA ACTGGCCGAA GTCACGCTGC AGCTGCCCGA AACCCCGGTG
TCGCTGCTGC TGCCCAACGC CAGCATCCAG CGCCAGCAGG GCCAGACCGG CGTCTGGCGG
CTGGACGGCG GCAAGCTGGT CTTTGCGCCG GTGCAGCTGG GCGCCCACAG CCTGGACGGC
CAGGTGCAGG TGCTGGACGG CGTGAAAGCC GGCGACGAGG TGGTGGTCTA CAGCCAGAAA
GCCCTGAGCG CAGGCACCCG CGTGCAGGTG GTCGATGCGC TGGCGAAAGG CCAAACCGGC
CCCGCCGGAG CCACTCCATG A
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| Protein sequence | MKLKLFLSRR MALGGLALLL VGALAFVALR TGPLAPTRVT VAAVQQGKLS PALFGIGTVE
ARRSWMVGPT VAGRVLSVKV DVGDAVKAGQ LLAEMDPVDL DQRLSALDAS LARARSTQAA
AQAQVRDATA RRELAAMNAQ RNQDLAAQNF ISAGALEARL QERASADAGL QAAQANLAGA
GQDVARQRAE RAALAQQRGN VRLLAPADGV VTSRDAEAGS TVVAGQPVLR LIDPASLWVR
LRVDQGRSAG LAPGLKARVV LRSQPRTALT GQVARVELLA DSVTEERIAQ VAFDAADGTT
SGASVGELAE VTLQLPETPV SLLLPNASIQ RQQGQTGVWR LDGGKLVFAP VQLGAHSLDG
QVQVLDGVKA GDEVVVYSQK ALSAGTRVQV VDALAKGQTG PAGATP
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