Gene Pnap_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2822 
Symbol 
ID4686878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2964742 
End bp2966166 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content61% 
IMG OID639835830 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_983045 
Protein GI121605716 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.209873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000587294 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACCC CAAAAAAAGT CATCCCCATC ATCGCGCAAG CGGCGGACGC CGAAATGATC 
TCCCTGTACG CGGCGCACGA GAAAATCTAT CCCCGCAGCG TTTCGGGCTT TTTTGCCAGT
TGGCGCTGGG GCGTGGTGTT TTTGACCCAG CTGGTGTTCT ACGGTCTGCC GTGGATTGAA
TGGGGACAGC GCCAGGCGGT GCTGTTTGAC CTGGCCTCCC GGCGTTTCTA CATCTTCGGG
CTGGTGCTGT ATCCGCAGGA CTTTATCTAC CTGACGGGCA TCCTGGTCAT CTCGGCCCTG
TCGCTGTTCC TGTTCACGGC GGTGGCCGGG CGCCTGTGGT GCGGCTACGC CTGTCCGCAG
ACGGTTTACA CCGAGATTTT TCTCTGGATA GAAAGGAAGA TGGAAGGCGA CCGCGCGGTC
CAGATGCGCC GCGATGGCCA GCCCTGGTCG CCGGGCAGGC TGTGGCGAAA AGGCGGCAAG
CACCTGCTGT GGCTGGCGGT GGCCTTGTGG ACCGGATTCA CGTTTGTAGG CTACTTCACG
CCCATCAAGG TGCTGGGCAT GGAATTTGTG CAAATGAGCA TGAGTTCCTG GGAAGCCTTC
TGGACTTTTT TCTACGGCTT TGCCACCTAC GGCAACGCCG GCTTCATGCG CGAGCAGGTG
TGCAAGCACA TGTGCCCTTA TGCGCGCTTT CAAAGCGCCA TGTTTGACAA GGACACGCTG
ATCGTCACCT ACGACGCCGA GCGCGGCGAC CCGCGCGGCG CCCGTTCGCG CAAGGCTGAC
CCGGCAGCGC TGAACCTGGG TTCGTGCGTT GACTGCAACC TGTGTGTCCA GGTCTGCCCC
ACCGGCATCG ATATTCGCAA AGGCCTGCAG TACGAGTGCA TTGGCTGCGG CGCCTGTGCC
GATGTGTGCA ACACTGTGAT GGACAAGATG GGCTACGAGC GCGGACTGGT GAAATACACC
ACCGAAAACG CCATGAAGAA CAAGTGGACC CAGGCGCAGA CCTGGCGCCA TGTGCTGCGG
CCCCGCATCT TGATCTACAC GGCAATCTTG CTGGGCATTG TCATGGCCAT GCTGGTCAGC
CTGACGCTGC GCACGCCGTT CAAGGTGAAT GTGGTGCGTG ACCGTGGCGT CATGGCGCGC
ATTGTCTCGG GCGGCAACAT CGAGAACGTC TATCAGTTGC AGGTGATGAA CGCCACGGAG
GCCGATCAGC GCTACAAAAT CCGCGTCACG GGCCTGCCTG GCCTGGCCAT CACGTCGGAA
GACGTGGTGA TGGTCGAGTC CACCCAGGCG CGCCGGCTGG CCGTCCGGGT GCAGGCGCCG
TATGAGGCGG CGGCGCCGGG AACACACCCG ATCGCATTTG AAATCGACGC GCTGGACTCT
GCGGGTCATT TGGTGGAAAA ATCAGTGTTT ATGGTTCCCC GCTAG
 
Protein sequence
MTTPKKVIPI IAQAADAEMI SLYAAHEKIY PRSVSGFFAS WRWGVVFLTQ LVFYGLPWIE 
WGQRQAVLFD LASRRFYIFG LVLYPQDFIY LTGILVISAL SLFLFTAVAG RLWCGYACPQ
TVYTEIFLWI ERKMEGDRAV QMRRDGQPWS PGRLWRKGGK HLLWLAVALW TGFTFVGYFT
PIKVLGMEFV QMSMSSWEAF WTFFYGFATY GNAGFMREQV CKHMCPYARF QSAMFDKDTL
IVTYDAERGD PRGARSRKAD PAALNLGSCV DCNLCVQVCP TGIDIRKGLQ YECIGCGACA
DVCNTVMDKM GYERGLVKYT TENAMKNKWT QAQTWRHVLR PRILIYTAIL LGIVMAMLVS
LTLRTPFKVN VVRDRGVMAR IVSGGNIENV YQLQVMNATE ADQRYKIRVT GLPGLAITSE
DVVMVESTQA RRLAVRVQAP YEAAAPGTHP IAFEIDALDS AGHLVEKSVF MVPR