| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2818 |
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| Symbol | rdgC |
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| ID | 4686852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2960751 |
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| End bp | 2961806 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835826 |
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| Product | recombination associated protein |
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| Protein accession | YP_983041 |
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| Protein GI | 121605712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.507867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000303219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTCCT TGCCGGGCAT TTTCGCCGTC ACTTCCCTTT TCACCCGAAC CCCAAAAAAT
CGGAAATCCA TGTTCAAATC CGCCTCCTTT TTCCGCATTG CCACCGACTT TGTCCTTCCG
CCTCTGGACG CCCTGGAAGA AGCACTCCAG TCGGCCCAGT TCATGCCCTG CGGCGCCACG
CAAGCCGAGT CTGTCGGCTG GGTTCCTCCT CGCGGCAACA AAAGCACCGT GATGGTGGAA
ACCGTCGGTA CGCAGGTCAT TTTGCGGCTG AGCATCGAGC GCCGCCCCCT GCCCGCTTCG
GCCGTCAAGG CCGAGGTGGA GGAACGGGTC GAAAAATACA AGCAGGAAAC CGGCCGCGAA
CGCGTCAGCG CCAAGATCAA AAAAGAGTTC AAGGAAGAAG CCATCCAGAG CCTGTTGCCG
CGCGCCTTCA CCAAGCGCTC ATCCACCACG CTGTGGATTG ACCCGGTCAA CAAATTTCTG
GTGGTTGACT CCGGCAGCCT GACCGGCGCC GACAAGGTGG TCAGCCAGTT GATTGAAGCC
CTGAGCGAAA TCCCCGGCAC CCGCCCGGGC CTCATGGCCA AACCGGTGCA GACCACGATG
GCCGCCGGCG CCGCCATGGC GCACTGGCTG GCCAGCCGCG AAGCCCCAGT CAGCTTCACG
GTGGACCGCG ACTGCGAACT CAAGATGCCC GACGACCAGA AATCGACCGT CCGCTATTCG
CGCCACACGC TTGAGATCGA CGAAGTGGCG GAACATATCG CATCGGGAAA AGTACCCACC
CAACTGGCGA TGACGTGGAA TGAGCGTGTC TCGTTCGTGC TGACCGACAT GGCCCAGATA
AAGAAAATCA AGCTGCTCGA CGTGGTGCTT GATGGCGTGC AGGAAAACGG CAAGGATGAC
GACGGCTTTG ACGCCGACGC GGCCATCGTG ACGGGCGAGC TATCGGACCT GATTCCTGAC
CTGCTTGAAG CCCTGGGCGG CGAGCTTTCA ATGGATGGAA CGTCTCCCCC GACAGTAGCC
GGACCATCTC CAGAGCGCCA ACTCGCTGCT GCGTAG
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| Protein sequence | MDSLPGIFAV TSLFTRTPKN RKSMFKSASF FRIATDFVLP PLDALEEALQ SAQFMPCGAT
QAESVGWVPP RGNKSTVMVE TVGTQVILRL SIERRPLPAS AVKAEVEERV EKYKQETGRE
RVSAKIKKEF KEEAIQSLLP RAFTKRSSTT LWIDPVNKFL VVDSGSLTGA DKVVSQLIEA
LSEIPGTRPG LMAKPVQTTM AAGAAMAHWL ASREAPVSFT VDRDCELKMP DDQKSTVRYS
RHTLEIDEVA EHIASGKVPT QLAMTWNERV SFVLTDMAQI KKIKLLDVVL DGVQENGKDD
DGFDADAAIV TGELSDLIPD LLEALGGELS MDGTSPPTVA GPSPERQLAA A
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