Gene Pnap_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2817 
Symbol 
ID4686862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand+ 
Start bp2960064 
End bp2960669 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID639835825 
ProductNUDIX hydrolase 
Protein accessionYP_983040 
Protein GI121605711 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.701424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.00000248326 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTTC TTCTTGACAA ATACAAACGT CAAAGCCGCT ACACTTATTT GATGCACCGT 
CCCCCCCTGA AACACTGCCG AGTTTGCGGC ACCGCCGTGG TTTATCGCCT GCCCGATGAT 
GGCGACACGA AGGAGCGGGC GGTCTGCCCG GCCTGCGCTA CCGTGCATTA CGAAAACCCG 
CTCAACGTCG TCGGCACCGT GCCGGTCTGG GGCGAAGATG GCGGCCAGGT ACTGCTGTGC 
AAACGCAATA TCGAACCGCG CTGGGGCAAA TGGACGCTGC CGGCCGGTTT CATGGAAATG 
GGCGAAACCA CCGCAGAAGG CGCTGCCCGC GAGACCGACG AGGAAGCCGG CGCGCAGTAT 
GAAATGCAAG CCCTTTTCAG CATCATGAAT GTGGCTCGCG TGGGTCAGGT CCACCTGTAT 
TACCGGGCGC GGCTGCTGAG CACCGAGTTC AATCCCGGCC ATGAAACCAT TGAAGCCCGG 
CTGTTCACCG AGTCGGAAAT TCCATGGGAC GAGATTGCCT TCAAGACGGT CAAGGAAACA 
CTGGAGCGCT ATTTCGACGA CCGCCGCAAG GGCCGGTTTG GCATCCATGT GCTTGATATC 
GCCTGA
 
Protein sequence
MNLLLDKYKR QSRYTYLMHR PPLKHCRVCG TAVVYRLPDD GDTKERAVCP ACATVHYENP 
LNVVGTVPVW GEDGGQVLLC KRNIEPRWGK WTLPAGFMEM GETTAEGAAR ETDEEAGAQY 
EMQALFSIMN VARVGQVHLY YRARLLSTEF NPGHETIEAR LFTESEIPWD EIAFKTVKET 
LERYFDDRRK GRFGIHVLDI A