| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2810 |
|---|
| Symbol | |
|---|
| ID | 4687551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2955312 |
|---|
| End bp | 2955869 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639835818 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983033 |
|---|
| Protein GI | 121605704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.451239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000330402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGC TGGCGGTACG GCGGCACGCC CGGCATCTGC TGCGCGACCC GACCGATGTC
GGCTCGCACA TGGCGCGCCT GCATGCCTCG CTTGAGCTGG CAGGCGCCGA GCCGGTGCAG
GGCGCGCTGG CCGACCTGTT CAGCTGTTTT GGTGCGCACG ATGCGCCCCT CAAGCGCACG
GCCCTGCAAC TCTCGCAGGG CCGTCTTTCG GCGCATGCGG CCCGCTGGTT CGAGGCGCAG
GTCGCACAGG CGGCACTGCC CGCCATCAAT CCCCTGGCGA CGCGCTGGAG CGTGCTGGCC
CACCCCTCGG CGGATATTTC AACCCGGGCC CGGCGTTGCA GCGTTGACGA TTCCCGCATG
CTGGCCGGGC AGGCGGTCCT GGCCTTCAGG GCCGCCGACA AGCCGGCTCA AAACGAATTT
TTGCACCACT GCGTGACCTG CCATGACAAC CTGGCATTCA TGCTGGCGCG CCGGGCACTG
CTCAAGTCTG GTGCGGCGTT GCCTGGCGAC TGGGAAGCGG TCAGCCTGCA ACTGGAACAA
ACCCGGGAGT TGACATGA
|
|---|
| Protein sequence | MARLAVRRHA RHLLRDPTDV GSHMARLHAS LELAGAEPVQ GALADLFSCF GAHDAPLKRT
ALQLSQGRLS AHAARWFEAQ VAQAALPAIN PLATRWSVLA HPSADISTRA RRCSVDDSRM
LAGQAVLAFR AADKPAQNEF LHHCVTCHDN LAFMLARRAL LKSGAALPGD WEAVSLQLEQ
TRELT
|
|---|
| |