| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2807 |
|---|
| Symbol | |
|---|
| ID | 4687567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2953075 |
|---|
| End bp | 2953725 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639835815 |
|---|
| Product | maleylacetoacetate isomerase |
|---|
| Protein accession | YP_983030 |
|---|
| Protein GI | 121605701 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000173489 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCAG CCATGAAGCT GCACAACTAT TTCCGCTCTT CCGCCTCGTT TCGCGTGCGG
ATTGCGCTTG AACTCAAGGG CCTGATCTAC GAATACATTC CGGTTCAGAT TGCCAGGGGC
GATCACAAGA AAGAGCCTTA TGCCGCGCTT TCCGCCGATC ACCTGGTGCC GCTGCTGGAG
GTCAATGGCG AAAGGCTGTC GCAGTCGATG GCCATCATTG AATACCTTGA CGAACTGCAT
CCCACGCCGG CACTGCTGCC AGCCGATGCA TTGGGCCGCG CGAGGGTTCG GGCTCTGGCG
CAGTCGATTG CCTGCGAGAT TCATCCGCTC AACAACCTGC GCGTGCTCAA GTACCTGGTG
CGCGATCTCA AGGTCGAGGA AGAGGCCAAG AACAACTGGT ATCGCCACTG GTGCCGGGAG
GGGCTGGAAG CTTTCGAACG GCAACTGGTC CAGTTGCCGG CGTCCACCTA TTGCTACGGA
AACACCCCGA CGCTGGCCGA CTGCTGCCTG GTGCCGCAAA TCTTCAATGC CGCGCGTTTC
AATGTGAATT TTGACGGATT GCCGCTGACC ATGGCCGCCT ACGACGCCTG CATGGCACTA
TCTGCCTTTC AAAAAGCACA GCCTTCGGCA TGCCCCGACA GCCAAGCCTG A
|
|---|
| Protein sequence | MLSAMKLHNY FRSSASFRVR IALELKGLIY EYIPVQIARG DHKKEPYAAL SADHLVPLLE
VNGERLSQSM AIIEYLDELH PTPALLPADA LGRARVRALA QSIACEIHPL NNLRVLKYLV
RDLKVEEEAK NNWYRHWCRE GLEAFERQLV QLPASTYCYG NTPTLADCCL VPQIFNAARF
NVNFDGLPLT MAAYDACMAL SAFQKAQPSA CPDSQA
|
|---|
| |