| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2805 |
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| Symbol | |
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| ID | 4687673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2950129 |
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| End bp | 2951892 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639835813 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_983028 |
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| Protein GI | 121605699 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000376259 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTG AACCTAGCTG GACACAAGCG GCCCAACAAA TGCAGGAAAC CCTGGGGGCA
GGTCTCACGC AGGCCATGTC CTCTCTGGGG GGCGGAGCCG CACCTGGTTT TCCTGCAATG
GACCTGTCGG TGTTCAAGAC CCTGGCTCCA TCCCAGCCCT CGATCACCTT CGAGCCATCC
AAATTACTCG AACTTCAGCA GCGCTATATA GCAGGTGCTT CGGCTATCTG GAACCAGGGC
CTTCAAGCCA CCGATGCGGC AGTGGTTGCG CCTGATCGCC GCTTCTCCGA TCCGGCTTGG
CAGGCCAGTC CGGTTTCAAA ATTCCTGGCA TCGGCCTACC AGCTCAACGC CAGCACCCTG
ATGGGCCTGG CTGAAGCCGT TGAAAGCGAC GCCAAAACCA AGGCTCGCCT GCGTTTCGCA
GTCGAGCAGT GGATGGCGGC TTCAGCGCCC AGCAACTTCC TGGCGCTGAA TGCCGAAGCC
CAGAAAAAAG CCATCGAAAC CAAAGGCGAA AGCATTGCCA GGGGCTTGGC GAACATGCTG
CACGACATGA AGCAGGGCCA TGTCTCGATG ACCGATGAGA GTATTTTTGA AGTCGGCAAA
AACGTCGCCA CCACCGAAGG CGCGGTGGTG TTTGAAAACG AATTTTTCCA GTTGCTCGAA
TACAAGGCAT TGACGGACAA GGTGTATGAA AAGCCTTTCC TGATGGTTCC GCCTTGCATC
AACAAGTTCT ACATCCTCGA CCTGCAGCCC GAAAACTCCC TGATTCGCTA TGCGACGGCC
CAAGGCCACA GAACCTTCGT GATGAGTTGG CGCAATCCGG ATCAGTCCAT GTCTGCAAAA
ACCTGGGACG ACTACATTGA GAACGCACCC ATCAAGGCCA TCGAGGTGGT GCGCGAGATT
ACAGGCGCCG ACACCATCAA TGCGCTCGGT TTTTGCGTGG GTGGCACTAT CTTGGGCACA
GCGCTGTCGG TGCTGGCGGC GCGCGGCGAA AAGCCGGTTG AAAGCGTCAC GCTGCTGACG
TCATTGCTGG ACTTTAGCGA CACCGGAATC CTGGACATCT TCATTGATGA AACATCGGTC
AAATACCGTG AAGCCGAGAT GGGCAAGGGC GGTTTGCTCA AGGGCAAGGA GTTGGCTTCA
ACCTTCAGCT TTCTGCGCCC GAACGACCTG GTCTGGAACT ATGTCGTCGG CAACTACCTC
AAGGGTGAAA CGCCGCCGCC GTTCGATCTG CTGTACTGGA ATAGTGATTC GACCAACCTG
CCTGGGCCGT TTTATGCCTG GTATCTGCGC AACACCTATT TTGAAAACAA CCTGATCAAG
CCTGGAAAAA CCGTGGTCTG CGGCGAGAAG GTTGATCTCG GCAAGCTCGA CATGCCGTTT
TACATCTACG GCTCGCGTGA AGACCATATT GTGCCGATTG GCGGGGCGTA TGCCTCCACG
CAAGTTTTGC CGGGCAAGAA GCGCTTCGTG ATGGGTGCTT CCGGCCACAT CGCCGGCGTC
ATCAATCCTC CGGCCAAAAA GAAGCGCAGC TACTGGACCA ATGACAAGCT GGCTTCCAGC
CGGACTTCCG GTGACAAGTA CCCTGCCGCG CAGGATGACT GGCAGAAAGA CGCGACCGAG
CATGCCGGCA GCTGGTGGCC AGACTGGTCC GAATGGCTGC AGGGACACGC AGGTAAACAG
AGCGCGGCAC CAAAAACCTA TGGCAGCCGC AAGTACAAGG CCATCGAACC TGCGCCAGGG
CGCTACGTCA AGGTCAAGGC CTGA
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| Protein sequence | MNFEPSWTQA AQQMQETLGA GLTQAMSSLG GGAAPGFPAM DLSVFKTLAP SQPSITFEPS
KLLELQQRYI AGASAIWNQG LQATDAAVVA PDRRFSDPAW QASPVSKFLA SAYQLNASTL
MGLAEAVESD AKTKARLRFA VEQWMAASAP SNFLALNAEA QKKAIETKGE SIARGLANML
HDMKQGHVSM TDESIFEVGK NVATTEGAVV FENEFFQLLE YKALTDKVYE KPFLMVPPCI
NKFYILDLQP ENSLIRYATA QGHRTFVMSW RNPDQSMSAK TWDDYIENAP IKAIEVVREI
TGADTINALG FCVGGTILGT ALSVLAARGE KPVESVTLLT SLLDFSDTGI LDIFIDETSV
KYREAEMGKG GLLKGKELAS TFSFLRPNDL VWNYVVGNYL KGETPPPFDL LYWNSDSTNL
PGPFYAWYLR NTYFENNLIK PGKTVVCGEK VDLGKLDMPF YIYGSREDHI VPIGGAYAST
QVLPGKKRFV MGASGHIAGV INPPAKKKRS YWTNDKLASS RTSGDKYPAA QDDWQKDATE
HAGSWWPDWS EWLQGHAGKQ SAAPKTYGSR KYKAIEPAPG RYVKVKA
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