| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2800 |
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| Symbol | |
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| ID | 4687641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2945424 |
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| End bp | 2946371 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639835808 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_983023 |
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| Protein GI | 121605694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000050595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTGA ACTTGACAAT AACTCCTCAA AAAATTGCTT CAGCCCGCGT TCTGGTGGTT
GGAGATGCCA TGCTGGACCG CTATTGGTAC GGTGCCGTGG ACCGCATTTC GCCCGAGGCC
CCGGTTCCCG TCGTGCGCGT GACACGTACC GAAGAACGCA TCGGCGCAGC GGCCAACGTG
GCCTACAACA TCGTGACGCT GGGCGCGCAA GCTTCATTGC TAAGCGTGGT GGGCGAGGAC
GAAGCCAGCC ATACGCTGGA ACACTTGGTT GCGAAGACCG GCATCACGCC CTATTTTGGC
CGCGATGCGA AGCTCAAGAC CACCGTCAAG CTGCGGGTGA TCGGGCGACA GCAGCAACTG
CTGCGGCTGG ATTTTGAAAA TACGCCTGAG CATGAAGTGC TGGCCTCCCA ATCCGCGACC
TTTGAAAAGC TGTATCCGCA GCATGATGCA GTGCTGTTTT CAGACTACGG CAAGGGCGGA
CTGGCACACA TCGTGACCAT GATTGCCCAG GCACGCGCTG CCGGCAAGGT GGTCCTGGTT
GATCCCAAAG GTTCGGACTT TGCACGCTAC AAAAATGCCA GCGTCATCAC GCCCAACCGG
GCAGAGCTTG AACAGGTGAT TGGCCTCTGG AGCAATGAAG CCGAACTGCA CACTAAAACC
CATAATCTGC GTGCCGCACT CAACCTGCAG GCCGTGCTGG TGACGCGCAG CGAAGAAGGC
ATGACGCTGT TCGATGCACA GGGAGAACTG CATGTACCCA CGGTGGCCAG AGAGGTGTTT
GACGTCACCG GTGCGGGCGA TACCGTGATT GCCACACTGG CCACGATGGC GGCGGCCGGC
ATGAGTCTGC GTGATGCCGT ACCGATTGCC AACCGTGCTG CTGGCATTGT CGTCGGCAAG
TTTGGTACGG CCACCGTCAA TTACAGCGAA CTCTTCGCAT TCTCCTGA
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| Protein sequence | MNLNLTITPQ KIASARVLVV GDAMLDRYWY GAVDRISPEA PVPVVRVTRT EERIGAAANV
AYNIVTLGAQ ASLLSVVGED EASHTLEHLV AKTGITPYFG RDAKLKTTVK LRVIGRQQQL
LRLDFENTPE HEVLASQSAT FEKLYPQHDA VLFSDYGKGG LAHIVTMIAQ ARAAGKVVLV
DPKGSDFARY KNASVITPNR AELEQVIGLW SNEAELHTKT HNLRAALNLQ AVLVTRSEEG
MTLFDAQGEL HVPTVAREVF DVTGAGDTVI ATLATMAAAG MSLRDAVPIA NRAAGIVVGK
FGTATVNYSE LFAFS
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