Gene Pnap_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2789 
Symbol 
ID4687637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2932409 
End bp2933041 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID639835797 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_983012 
Protein GI121605683 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000026968 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00127263 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAC TCAACAAAGT GGCAATGTTG TTTGCTTCCG CAGCGCTTGT TACCGCCGCT 
GGTGCGCAAA CTATCGACAA CTGGAAGAAC GGCAACGGCG ATTTGGTCTG GAAAAATGGT
ACCAATGAGC TTTGCTGGCG TGACAACTTC TGGACTCCAG CGACTGCTGC TCCAGGTTGC
GATGGCGCAA TTGTTCCTGT TGTTGCTCCT GTGGTCGTTG CTTCTGCTCC GCCTGTAGCC
GCTCCTGTGG TTGTTCCAGT GGCTCCCCCT GCTGCTACCA AAGTGACTTA CGCTGCCGAT
GCTTTCTTTG ACTTTGACAA GTCAGTGATC AAGCCGGCAG GTAAGGAAAA GCTGGATGAC
CTGATTGGAA AAATCAAGGA CATCAATCTG GAAGTAATCA TTGCCGTGGG TCACACTGAC
TCTGTCGGCA GCGATTCTTA CAACCAGAAG CTGTCGGTTC GCCGTTCTGA AGCTGTGAAA
GCTTACTTGG TGTCCAAAGG CATTGAGAAA AACCGCGTTT ATACCGAAGG CAAAGGCGAG
AAACAGCCTG TAGCCGACAA CAAAACCGCC GAAGGCCGTG CGAAAAACCG TCGCGTGGAA
ATCGAAGTGG TTGGTACCCG CGCCAACAAG TAA
 
Protein sequence
MNKLNKVAML FASAALVTAA GAQTIDNWKN GNGDLVWKNG TNELCWRDNF WTPATAAPGC 
DGAIVPVVAP VVVASAPPVA APVVVPVAPP AATKVTYAAD AFFDFDKSVI KPAGKEKLDD
LIGKIKDINL EVIIAVGHTD SVGSDSYNQK LSVRRSEAVK AYLVSKGIEK NRVYTEGKGE
KQPVADNKTA EGRAKNRRVE IEVVGTRANK