| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2787 |
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| Symbol | |
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| ID | 4689897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2930913 |
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| End bp | 2931578 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639835795 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_983010 |
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| Protein GI | 121605681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00496025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0014162 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAACA ATATCAATGC CGTGCTGTTC GATCTGGATG GCACGCTGAT TGACAGTGCT
CCTGACCTTG GTGCTGCCGC TGACAAAATG CGCACCGATC GAGGCCTTGA ATCGTTGCCT
TTGTCGCTGT ACCGCCCGAT GGCAGGTGCC GGTGCACGAG GCATGATTGC CGTGGCTTTT
GGCCTGACGC CTCAAGACGC TGAATTTGAC AGGCTGAAGG AGGAGTTCTT TGCCAATTAC
GAAGCGCGTC TGGTGGAGCA CACCTATGTG TTTGACGGTG TGGCTGAGCT GATTGCACGC
ATTTGTCACG CTGGCCTCAA GTGGGGGGTC GTCACCAACA AGTCAGCCCG CTTCACTGTT
CCGTTAACTC GGGCCATGCC ACTTTTCAGG ACAGCCAAAA CCATCATCAG TGGCGATACC
ATGCCTCATG CAAAGCCGCA CCCCGCTCCT TTGCTGGAAG CCGCGCGCCA GCTTGGAATG
GCTCCCGAAC GCTGCATTTA TGTAGGCGAT GATGAGCGCG ATATTCTGGC AGGCCGCGCA
GCAGGCATGC TCACAGTGGC GGCAGCTTAC GGCTATCTGG GTGCCGTGAA CGATACTGCG
GGCTGGAAAG CCAACTTTAC GATTGCCACG CCTTCGGCCC TCTTGAATTT GCTGAAAATG
GCTTAA
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| Protein sequence | MFNNINAVLF DLDGTLIDSA PDLGAAADKM RTDRGLESLP LSLYRPMAGA GARGMIAVAF
GLTPQDAEFD RLKEEFFANY EARLVEHTYV FDGVAELIAR ICHAGLKWGV VTNKSARFTV
PLTRAMPLFR TAKTIISGDT MPHAKPHPAP LLEAARQLGM APERCIYVGD DERDILAGRA
AGMLTVAAAY GYLGAVNDTA GWKANFTIAT PSALLNLLKM A
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