Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2783 |
Symbol | |
ID | 4687618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2926734 |
End bp | 2927699 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835791 |
Product | hypothetical protein |
Protein accession | YP_983006 |
Protein GI | 121605677 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00292274 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTGGT TGACTGGAAT TTTCGTGGGC GTTCAGGCAT GGCTGTTCCA GGCGCTGGTG CAACCGGCCC TGTTCGCGCT CGGCCTGAGC AGCCTGTTCG AGGATGCTTA TGGGGCGACC GCCTGGTTCA TGATGGGCGT GATCCAGATC ATCATCTTGC TGGCCGTGAT TAGCCCGCTG CAGCGCTGGC GGCCGGTGGA GGCGATGGAC TCGCCCAGTG AGCGGGCCAG CATACGCGTT GACGTTCTCT ACACGCTGCT TCACCGGCTG GGCTTGTTCA AGCTGGCGCT GTTCTTTACC CTTGATCCCT GGTTTGATGA AATCTTCGGT GCGCTGCGGA CAGCGGGCTA CGGCACTTTT CACCTCGACC AGCTGTGGCC CGGCGTCACT GACCAGGCCG TCGTCAGCCT GCTGATCTAC CTGCTGGCAT TTGACTTCGT CGGCTACTGG ACGCACCGGG GCCAGCACCA GTTGGAGTGG TGGTGGCGCC TGCATTCGCT GCACCATTCG CAGCGGCAAA TGACGATGTG GAGCGACAAC CGCAGCCACC TGCTCGACAG CATCGTGCTC GACAGCGTCG TCGTCGTCGT GGCGCAACTC ATTGGCGTGG CCCCCGACCA GTTCATCGTC ATCGTCACCC TGACGCAGCT CAGCGAAAGT TTCCAGCATG CCAATGTGCG GCTGTGGTTT GGCCGCATAG GCGAGCGTCT CTGGGTCAGC CCGCGCTTTC ACCGGCTGCA CCACAGCATC GGCATCGGCC ATGAAACCAA CGGCCCGAAA ACGCTGGGCG GGCATAACTT CGGCGTGCTG CTGCCGTGGT GGGACATGCT GTTTGGCACG GCCAATTTCG AGCAGCGTTA CGAGCCGACC GGCGTGCGCG ACCAGGTCGA GGCCAACCGT GATTACGGCC GTGGTTTCTG GTCCCAGCAG TGGCTGGGCA TGAAGCGCCT GTTCGGGCGC GCATGA
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Protein sequence | MDWLTGIFVG VQAWLFQALV QPALFALGLS SLFEDAYGAT AWFMMGVIQI IILLAVISPL QRWRPVEAMD SPSERASIRV DVLYTLLHRL GLFKLALFFT LDPWFDEIFG ALRTAGYGTF HLDQLWPGVT DQAVVSLLIY LLAFDFVGYW THRGQHQLEW WWRLHSLHHS QRQMTMWSDN RSHLLDSIVL DSVVVVVAQL IGVAPDQFIV IVTLTQLSES FQHANVRLWF GRIGERLWVS PRFHRLHHSI GIGHETNGPK TLGGHNFGVL LPWWDMLFGT ANFEQRYEPT GVRDQVEANR DYGRGFWSQQ WLGMKRLFGR A
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