Gene Pnap_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2783 
Symbol 
ID4687618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2926734 
End bp2927699 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID639835791 
Producthypothetical protein 
Protein accessionYP_983006 
Protein GI121605677 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00292274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTGGT TGACTGGAAT TTTCGTGGGC GTTCAGGCAT GGCTGTTCCA GGCGCTGGTG 
CAACCGGCCC TGTTCGCGCT CGGCCTGAGC AGCCTGTTCG AGGATGCTTA TGGGGCGACC
GCCTGGTTCA TGATGGGCGT GATCCAGATC ATCATCTTGC TGGCCGTGAT TAGCCCGCTG
CAGCGCTGGC GGCCGGTGGA GGCGATGGAC TCGCCCAGTG AGCGGGCCAG CATACGCGTT
GACGTTCTCT ACACGCTGCT TCACCGGCTG GGCTTGTTCA AGCTGGCGCT GTTCTTTACC
CTTGATCCCT GGTTTGATGA AATCTTCGGT GCGCTGCGGA CAGCGGGCTA CGGCACTTTT
CACCTCGACC AGCTGTGGCC CGGCGTCACT GACCAGGCCG TCGTCAGCCT GCTGATCTAC
CTGCTGGCAT TTGACTTCGT CGGCTACTGG ACGCACCGGG GCCAGCACCA GTTGGAGTGG
TGGTGGCGCC TGCATTCGCT GCACCATTCG CAGCGGCAAA TGACGATGTG GAGCGACAAC
CGCAGCCACC TGCTCGACAG CATCGTGCTC GACAGCGTCG TCGTCGTCGT GGCGCAACTC
ATTGGCGTGG CCCCCGACCA GTTCATCGTC ATCGTCACCC TGACGCAGCT CAGCGAAAGT
TTCCAGCATG CCAATGTGCG GCTGTGGTTT GGCCGCATAG GCGAGCGTCT CTGGGTCAGC
CCGCGCTTTC ACCGGCTGCA CCACAGCATC GGCATCGGCC ATGAAACCAA CGGCCCGAAA
ACGCTGGGCG GGCATAACTT CGGCGTGCTG CTGCCGTGGT GGGACATGCT GTTTGGCACG
GCCAATTTCG AGCAGCGTTA CGAGCCGACC GGCGTGCGCG ACCAGGTCGA GGCCAACCGT
GATTACGGCC GTGGTTTCTG GTCCCAGCAG TGGCTGGGCA TGAAGCGCCT GTTCGGGCGC
GCATGA
 
Protein sequence
MDWLTGIFVG VQAWLFQALV QPALFALGLS SLFEDAYGAT AWFMMGVIQI IILLAVISPL 
QRWRPVEAMD SPSERASIRV DVLYTLLHRL GLFKLALFFT LDPWFDEIFG ALRTAGYGTF
HLDQLWPGVT DQAVVSLLIY LLAFDFVGYW THRGQHQLEW WWRLHSLHHS QRQMTMWSDN
RSHLLDSIVL DSVVVVVAQL IGVAPDQFIV IVTLTQLSES FQHANVRLWF GRIGERLWVS
PRFHRLHHSI GIGHETNGPK TLGGHNFGVL LPWWDMLFGT ANFEQRYEPT GVRDQVEANR
DYGRGFWSQQ WLGMKRLFGR A