| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2772 |
|---|
| Symbol | thyA |
|---|
| ID | 4687842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2915860 |
|---|
| End bp | 2916690 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639835780 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_982995 |
|---|
| Protein GI | 121605666 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.023604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CAATCCGCCA CCAGTACGAA GATCTCATGC GCCTTGTGGC CACGCAAGGT
GCGTTCAAGG CCGACCGCAC CGGCACCGGA ACAAAAAGCG TGTTTGGCCA CCAGATGCGC
TTTGACCTGA ACGAAGGCTT TCCGCTGGTC ACGACCAAGA AGGTCCACCT CAAGTCCATC
ATCCAGGAGC TGCTGTGGTT CCTGACCGGC TCCAGCAGCA ACCACTGGCT GACCGAGCGC
GGCGTGACGA TCTGGAACGA ATGGGCGCGC GCGGACGGCG ACCTTGGGCC GGTCTATGGC
GTGCAGTGGC GCAGCTGGCC GACGCCGGAC GGCGGCCACA TCGACCAGAT CGCCGAGGTC
ATCAAGACCC TCAAGACCAA CCCCGACTCG CGCCGCATCA TCGTCAGCGC CTGGAACGTC
GCCGACCTCG ACAAGATGGC GCTGATGCCC TGCCACGCGC TGTTCCAGTT CTACGTCGCC
CCGGCCACCG AGGCCGGCGG CAAGGGCAAG CTGAGCTGCC AGTTGTACCA GCGCAGCGCC
GACATCTTCC TGGGCGTGCC GTTCAACATT GCCAGCTATG CCCTGCTGAC GCACATGGTG
GCGCAGCAGT GCGACCTGGA CGTCGGCGAC TTCATCTGGA CCGGCGGCGA CTGCCATATC
TACAGCAACC ACCAGGAACA GGTAGCCCTG CAACTGGGCC GCGCGCCTTT CGCCTATCCG
CTGCTCCACA TCAGGCGCAA GCCCGATTCG ATCTTCGACT ACCAGTTCGA GGACTTCGAG
TTCCTCGACT ACCAGCACCA TCCGGCCATC AAGGCGCCGG TGGCCGTTTA A
|
|---|
| Protein sequence | MTRPIRHQYE DLMRLVATQG AFKADRTGTG TKSVFGHQMR FDLNEGFPLV TTKKVHLKSI
IQELLWFLTG SSSNHWLTER GVTIWNEWAR ADGDLGPVYG VQWRSWPTPD GGHIDQIAEV
IKTLKTNPDS RRIIVSAWNV ADLDKMALMP CHALFQFYVA PATEAGGKGK LSCQLYQRSA
DIFLGVPFNI ASYALLTHMV AQQCDLDVGD FIWTGGDCHI YSNHQEQVAL QLGRAPFAYP
LLHIRRKPDS IFDYQFEDFE FLDYQHHPAI KAPVAV
|
|---|
| |