Gene Pnap_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2769 
Symbol 
ID4687887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2912679 
End bp2913893 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID639835777 
Productputative ribonuclease BN 
Protein accessionYP_982992 
Protein GI121605663 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0433853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC CCCCTTCACT GGAGGCCTTG CTCGTTCAGC TTTCGCATTT TCCCTGGCGC 
GACACCGCCA TCACGCTGCG CAACCGTTTC CGGGAAGACC GCATGGGCCT GACCGCCAGC
AGCCTGACCT TCACCACGTC GATTGCGCTG GTGCCATTTT TTACCGTGGC GCTGGCGGTG
TTCACCGCCT TTCCGATGTT TTCCAAGCTG CAGGGCGCGC TGGAGGCCTG GCTGGTCAAA
AGCCTGATTC CCGACAACAT CGCGCGCCAG GTGCTGGGCT ACCTGACCCA GTTCAGCGGC
CAGGCCAGCA AGCTGGGCGT CGCGGGCCTG GCGGTGCTGG TGGTGACGGC GATTGCGCTG
ATCCTGACGA TTGACCGCAC GCTGAACAGC ATCTGGCGCG TGCGCAAACC CCGGCCGCTG
GGGCAGCGGG TGCTGATTTA CTGGGCCGCC ATCACGCTCG GGCCGCTGGT GCTGGCGGCC
AGCCTGGCGG TGACTTCGTA TGTGGTGTCG GCCTCCAGCG GCCTGGTGGG CGCCTTGCCC
TTCAGCCTGC GGTTTTTGCT GGACGTGGCG CAGTTTTTCC TGGTGGCCGG CGGCGTGGCC
GCGCTGTACC GCTATGTGCC CAACACCTAC GTCCAATGGG CGCACGCCTT CGCGGGCGGC
CTGTTCGTGG CCGCAGGCCT GGAGACCGGC AAGAAAGTCA TGGGCATTTA CCTGACCGCG
GTGCCGACGT ATTCGCTGGT GTACGGGGCT TTTGCCGCCT TGCCGATCCT GCTGGTGTGG
ATCTACGTGT CTTGGATCAT CGTGCTGATG GGCGCCGTCA TCACCGCCTG GCTGCCCAGC
CTGCTGGCCG GCGTGCCGCG TCGCGGCAGC GCGCACGGCT GGCATTTCCA GCTGGCCATC
GAAGTGCTGC AGCACCTGAA CGAGGCGCGC GGCACGGCGC GCATGGGCAT GAGCGCCTCG
CGGCTGGGCG AGTTGCTCGA AGTCGATGGG CTGCAGCTGG AGCCGGTGCT CGAAACGCTG
GCCGAGCTGG ACTGGATTGG CCAGCTCAAT GAGGCCGAAG GAAGCGCCGA GTCCCGCTAC
CTGCTGCTGG TTGACCCCGA CACCACGCCT TTGGCGCCGC TGATGGAGAA ACTGCTGTTA
GAGCGCGCGC CTTCGGTCAA TAATTTATGG GAAAACGCCC GTTGGCGCAT GCTGCACCTG
CGTGATGCGC TATGA
 
Protein sequence
MKIPPSLEAL LVQLSHFPWR DTAITLRNRF REDRMGLTAS SLTFTTSIAL VPFFTVALAV 
FTAFPMFSKL QGALEAWLVK SLIPDNIARQ VLGYLTQFSG QASKLGVAGL AVLVVTAIAL
ILTIDRTLNS IWRVRKPRPL GQRVLIYWAA ITLGPLVLAA SLAVTSYVVS ASSGLVGALP
FSLRFLLDVA QFFLVAGGVA ALYRYVPNTY VQWAHAFAGG LFVAAGLETG KKVMGIYLTA
VPTYSLVYGA FAALPILLVW IYVSWIIVLM GAVITAWLPS LLAGVPRRGS AHGWHFQLAI
EVLQHLNEAR GTARMGMSAS RLGELLEVDG LQLEPVLETL AELDWIGQLN EAEGSAESRY
LLLVDPDTTP LAPLMEKLLL ERAPSVNNLW ENARWRMLHL RDAL