Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2769 |
Symbol | |
ID | 4687887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2912679 |
End bp | 2913893 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835777 |
Product | putative ribonuclease BN |
Protein accession | YP_982992 |
Protein GI | 121605663 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0433853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC CCCCTTCACT GGAGGCCTTG CTCGTTCAGC TTTCGCATTT TCCCTGGCGC GACACCGCCA TCACGCTGCG CAACCGTTTC CGGGAAGACC GCATGGGCCT GACCGCCAGC AGCCTGACCT TCACCACGTC GATTGCGCTG GTGCCATTTT TTACCGTGGC GCTGGCGGTG TTCACCGCCT TTCCGATGTT TTCCAAGCTG CAGGGCGCGC TGGAGGCCTG GCTGGTCAAA AGCCTGATTC CCGACAACAT CGCGCGCCAG GTGCTGGGCT ACCTGACCCA GTTCAGCGGC CAGGCCAGCA AGCTGGGCGT CGCGGGCCTG GCGGTGCTGG TGGTGACGGC GATTGCGCTG ATCCTGACGA TTGACCGCAC GCTGAACAGC ATCTGGCGCG TGCGCAAACC CCGGCCGCTG GGGCAGCGGG TGCTGATTTA CTGGGCCGCC ATCACGCTCG GGCCGCTGGT GCTGGCGGCC AGCCTGGCGG TGACTTCGTA TGTGGTGTCG GCCTCCAGCG GCCTGGTGGG CGCCTTGCCC TTCAGCCTGC GGTTTTTGCT GGACGTGGCG CAGTTTTTCC TGGTGGCCGG CGGCGTGGCC GCGCTGTACC GCTATGTGCC CAACACCTAC GTCCAATGGG CGCACGCCTT CGCGGGCGGC CTGTTCGTGG CCGCAGGCCT GGAGACCGGC AAGAAAGTCA TGGGCATTTA CCTGACCGCG GTGCCGACGT ATTCGCTGGT GTACGGGGCT TTTGCCGCCT TGCCGATCCT GCTGGTGTGG ATCTACGTGT CTTGGATCAT CGTGCTGATG GGCGCCGTCA TCACCGCCTG GCTGCCCAGC CTGCTGGCCG GCGTGCCGCG TCGCGGCAGC GCGCACGGCT GGCATTTCCA GCTGGCCATC GAAGTGCTGC AGCACCTGAA CGAGGCGCGC GGCACGGCGC GCATGGGCAT GAGCGCCTCG CGGCTGGGCG AGTTGCTCGA AGTCGATGGG CTGCAGCTGG AGCCGGTGCT CGAAACGCTG GCCGAGCTGG ACTGGATTGG CCAGCTCAAT GAGGCCGAAG GAAGCGCCGA GTCCCGCTAC CTGCTGCTGG TTGACCCCGA CACCACGCCT TTGGCGCCGC TGATGGAGAA ACTGCTGTTA GAGCGCGCGC CTTCGGTCAA TAATTTATGG GAAAACGCCC GTTGGCGCAT GCTGCACCTG CGTGATGCGC TATGA
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Protein sequence | MKIPPSLEAL LVQLSHFPWR DTAITLRNRF REDRMGLTAS SLTFTTSIAL VPFFTVALAV FTAFPMFSKL QGALEAWLVK SLIPDNIARQ VLGYLTQFSG QASKLGVAGL AVLVVTAIAL ILTIDRTLNS IWRVRKPRPL GQRVLIYWAA ITLGPLVLAA SLAVTSYVVS ASSGLVGALP FSLRFLLDVA QFFLVAGGVA ALYRYVPNTY VQWAHAFAGG LFVAAGLETG KKVMGIYLTA VPTYSLVYGA FAALPILLVW IYVSWIIVLM GAVITAWLPS LLAGVPRRGS AHGWHFQLAI EVLQHLNEAR GTARMGMSAS RLGELLEVDG LQLEPVLETL AELDWIGQLN EAEGSAESRY LLLVDPDTTP LAPLMEKLLL ERAPSVNNLW ENARWRMLHL RDAL
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