Gene Pnap_2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2761 
Symbol 
ID4688300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2905126 
End bp2906502 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content70% 
IMG OID639835769 
Producthypothetical protein 
Protein accessionYP_982984 
Protein GI121605655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0046084 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.122953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA TTGCCCGTCC ACCGCTGCTC GTTGGTTGCG CAGCCGGTTT TTCAGGTGAC 
CGGACCGATG CGGCCGGCCC GGTGGTTGAC ACGCTGATCG CCCGGCTTGC CCAAGGCCCG
TCCGGGCAGC GTGCCTTCCT TATTTTTGAA ACCCTCGCCG AACGCACGCT GGCCCTGGCG
CAGCTTCGCC GGCGCGCCGA CCCCGAAGCC GGCTACGAGC CGCTGCTCGA CGCGATGCTG
CGCCCCGTGC TGGCGCGTTG CCTCCTGCAC GGCATCCGTA TCGTGAGCAA CTTTGGCGCG
GCCAACCCGC GTGCCGCGGC GCGGCACATT GCGCGCATGG CGCGCGAGCT TGGCGCAACG
GCACCGCGCA TTGCCGTGGT CGAGGGCGAC GACCTTTCCT CGCCGGAACA GCGCGCCTTG
CTGCGTGAGC AGCTCGGTGC CCGGATGGAC GGCCTGGCGG TGGTGAGCGC CAACGCCTAC
ATCGGCGCAG AGCCGATCGC AGCGGCACTC GATGCCGGCG CACAGATCGT GGTGTGCGGC
CGCGTGGCCG ATCCGTCGCT GACGGTCGGC CCCGCCATGT CCCACTTCGG CTGGCGAGCG
GACGACTGGA CGGTGCTGGG CCGGGCCACG ATGGCCGGGC ATCTCCTTGA ATGCGGCGCG
CAGGTCTGCG GCGGCTACTT CGCCGACCCG GGCTACAAGG ACGTGCCAGG GCTGGAGCGC
GTCGGCTTTC CGATTGCCGA AATCGAGGCA GATGGCCGGT GCACGATCGG CAAGGCGGAC
GGCACCGGCG GTCTGGTGAC GGAATCGACC GTCAAGGAGC AACTGCTCTA CGAGGTGCAT
GATCCCGCCG CCTACCTCAC GCCCGACGTG ATCGCCGACA TCGGGGAGGC ACAGGTCGCT
GCGCAGGACA CTGACCGGGT GCTGCTGACC GGCGTGCGCG GCCATGCACG CCCGTCGCAC
TACAAGGTCA ACGTCTGCCA CGAAGGCGGC TGGCTGGCCG AGGGCGAGAT CTCCTACGCC
GGCGCCCGCG CCGAAGCGCG TGCCCGCCTT GCCGCCGATG TGCTTCGCAG CCGCCTGGCG
GGCTTGACCT TGCGTGTCGA TCTGATCGGC GCGCTCAGCC TCTTCAATGA CGATGCCGGC
CATGCGCTCG CAGCGACCCC CGACAGCGGC ATGCGCGACG TGCGGCTGCG CGTTGCAGCC
ACGCATGCAG ACCGCGCCGA AGCCGAGCGC CTGGGCCGCG AGGTGATGGC GCTCTACACC
TGCGGCCCGG CCGGCGGCGG CGGCGTGCGC AGCACCCTGA CGCCGCGCCT CAACACCCTC
TCGTGCCTGC TTGCGCGCGA GGCCGTGCCC GTCCGATTCG AAATGGTGGC CCCATGA
 
Protein sequence
MTSIARPPLL VGCAAGFSGD RTDAAGPVVD TLIARLAQGP SGQRAFLIFE TLAERTLALA 
QLRRRADPEA GYEPLLDAML RPVLARCLLH GIRIVSNFGA ANPRAAARHI ARMARELGAT
APRIAVVEGD DLSSPEQRAL LREQLGARMD GLAVVSANAY IGAEPIAAAL DAGAQIVVCG
RVADPSLTVG PAMSHFGWRA DDWTVLGRAT MAGHLLECGA QVCGGYFADP GYKDVPGLER
VGFPIAEIEA DGRCTIGKAD GTGGLVTEST VKEQLLYEVH DPAAYLTPDV IADIGEAQVA
AQDTDRVLLT GVRGHARPSH YKVNVCHEGG WLAEGEISYA GARAEARARL AADVLRSRLA
GLTLRVDLIG ALSLFNDDAG HALAATPDSG MRDVRLRVAA THADRAEAER LGREVMALYT
CGPAGGGGVR STLTPRLNTL SCLLAREAVP VRFEMVAP