| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2756 |
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| Symbol | |
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| ID | 4688444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2899971 |
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| End bp | 2901200 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835764 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_982979 |
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| Protein GI | 121605650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.40043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.169061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTACT CTGCCTATCA ACTCCAGTCC GACCTGATGT CACCGTTTCG CCTGCTGGCC
CAGGGCACCA GCGCCGCCCT GTGGCTGAAC AGGACCGAGG GCAGTTGGCT GCGCAAGTTC
TCTGCGTCGA TGGAGGTGTT TTCGCGCATG CGATTGACCC ATACACGGCC GGCTTACGAC
ATCACGTCGG TGAAAATCGG CGAGCAGGAG TTTCCGGTCA CCGAGGAAAC CGTGCTGAGC
ATGCCGTTTG GAACGCTGCT GCGCTTCAAA AAGGAAGCTT CCAGCGACCT GCCCCACCAG
CCGCCGGTGC TGCTGGTGGC GCCGCTGTCA GGCCATTTCG CCACCTTGCT GCGCGAGACG
GCCCGCACCC TGCTACAAGA CCACGATGTG TACATCACCG ACTGGCACAA CGCGCGCGAC
GTTTCGCTAC GCCACGGCGC TTTTGCGCTG GACGACTACA TCGACCACAT GATCCGCTTC
ATCCAGACGA TTGGCCCCGG CACGCATGTG ATCGCCGTGT GCCAGCCCTG CGTGGCGGCG
CTGGCGGCCA CGGCCCTGAT GGCCGAAAAC GATGACCCGG CCACGCCGCG CAGCCTGACG
CTGATGGCCG GCCCGGTGGA CTGCCGGGTG AACCCCACGG GCGTCAACAC GCTGGCCACC
AGCAAGCCCA TCGAATGGTT CGAGAAAAAC CTGATCAGCC ATGTGCCGCT GCCCCACGCC
GGCCATATGC GCCGCGTGTA CCCCGGTTTT GTGCAGGTCA GCGCGTTTCT GGCCATGAAC
CTGGAGCGCC ACAAGAAGTC GTTCAAGGAC ATGTACCAGC ACCTGGTCGA GGGCGACAAG
GAAAAAGCCG ATGTGATCCG CAAGTTTTAC GATGAATACT TGGCCGTGAA CGACCTGCCG
GCAGAGTTCT ACCTGGAAAC CGTCGAAAAA GTGTTTCAGA CCTACGACCT GCCGCTCGGA
AAGCTCAGCT ACCGGGGCCG CATCGTGAAG CCCGCAGCCA TTCGCCATAC GGCGCTCATG
ACGGTCGAAG GGGAACGCGA CGACATTTGC GCCGTCGGCC AGACCCTGGC CGCGCAAGAC
CTGTGCAGCA GCATTCCCCC CTACATGCGC ACCCACCACA TCCAGACCGG CGTGGGCCAT
TACGGGGTGT TCAGCGGCCG CCGGTGGAAC CAGCTGATTT ACCCGCGCGT GCGGGAAATG
ATTCACGCAA GCATGCGTCC AGGCATGTAA
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| Protein sequence | MLYSAYQLQS DLMSPFRLLA QGTSAALWLN RTEGSWLRKF SASMEVFSRM RLTHTRPAYD
ITSVKIGEQE FPVTEETVLS MPFGTLLRFK KEASSDLPHQ PPVLLVAPLS GHFATLLRET
ARTLLQDHDV YITDWHNARD VSLRHGAFAL DDYIDHMIRF IQTIGPGTHV IAVCQPCVAA
LAATALMAEN DDPATPRSLT LMAGPVDCRV NPTGVNTLAT SKPIEWFEKN LISHVPLPHA
GHMRRVYPGF VQVSAFLAMN LERHKKSFKD MYQHLVEGDK EKADVIRKFY DEYLAVNDLP
AEFYLETVEK VFQTYDLPLG KLSYRGRIVK PAAIRHTALM TVEGERDDIC AVGQTLAAQD
LCSSIPPYMR THHIQTGVGH YGVFSGRRWN QLIYPRVREM IHASMRPGM
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