| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2744 |
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| Symbol | |
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| ID | 4688489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2888079 |
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| End bp | 2889083 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835752 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_982967 |
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| Protein GI | 121605638 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.972914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0520687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA CTTCACCACG GGCATCGCCC CAAGACAGCG CCGAATCGGT GGTTGACAAG
CAGCGCGGCA TCCAGCGGCA GCAAGACGAC AAGGACGCTG AAAAATCCGG CGGCGGGCAG
CCCAAAAAGC AAGCCGTCCA GGTCGGCGTG GCCGAGCAGC CCGCGCCGCC CATGCCCGCG
CAGCACCTCG AAAAACCGGG CCTGGAGGCC GACATGGACT TGCAGCCCAG GTTCATGGCA
CCGGGCTACA AGGGCAGCGG CAAGCTCGAA GGGCTGACCG CGCTGGTCAC CGGCGGCGAC
TCGGGCATTG GCCGCGCGGT GGCGGTGCTG TTTGCGCGCG AAGGCGCCGA CGTGGCGATT
TTTTACCTGA ACGAACATGC CGATGCCGAG GAAACGAAGC GCTGCGTCGA GGCCGAGGGC
CGGCGCTGCC TGCTGATGTC CGGCGACGTG AAGGACGCAG CCTTCTGCCG CAAGGTCGTC
GAGAAAACCG TCAGGGAACT CGGCAAGCTC GACATCCTGG TGAACAACGC GGCCTTCCAG
GAGCATGCCG ACTCGCTCGA AGACCTGACC GAGGAGCGCT TCGACGAAAC CCTGCGCACC
AACATCTACG GCTACTTCCA CATGGCCAAG GCCGCGCTGC CGCACCTCAA GCGCGGCGCG
TGCATCATCA ACACCGGCTC GGTCACGGGG CTCGAAGGCA GCGCCAAGCT GCTCGACTAC
TCGGCCACCA AGGGCGCGAT CCATGCGTTC ACCAAGTCGC TGGCCAGCAA CCTGATCGAC
AAGGGGATTC GCGTCAATGG GGTAGCGCCC GGCCCGGTCT GGACACCGCT GAATCCGGCC
GACAAGACGC CCGAGGCGAT CCGCAAATTC GGCGCCGACA CCGACATGAA GCGCCCGGCG
CAACCCGAAG AGCTGTCGCC GGCCTATGTG TTCCTGGCTT CGCCGGTGTG CGCGAGCTAT
ATCACCGGCA TCGTGCTGCC GGTGACGGGG AGTGTTGGCG CCTGA
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| Protein sequence | MAETSPRASP QDSAESVVDK QRGIQRQQDD KDAEKSGGGQ PKKQAVQVGV AEQPAPPMPA
QHLEKPGLEA DMDLQPRFMA PGYKGSGKLE GLTALVTGGD SGIGRAVAVL FAREGADVAI
FYLNEHADAE ETKRCVEAEG RRCLLMSGDV KDAAFCRKVV EKTVRELGKL DILVNNAAFQ
EHADSLEDLT EERFDETLRT NIYGYFHMAK AALPHLKRGA CIINTGSVTG LEGSAKLLDY
SATKGAIHAF TKSLASNLID KGIRVNGVAP GPVWTPLNPA DKTPEAIRKF GADTDMKRPA
QPEELSPAYV FLASPVCASY ITGIVLPVTG SVGA
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