Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2729 |
Symbol | |
ID | 4688374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2874806 |
End bp | 2875678 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835737 |
Product | inner-membrane translocator |
Protein accession | YP_982952 |
Protein GI | 121605623 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.279205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00299657 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTGACCA TCCTTTTTGA CGGTATTGCC TACGGCATGC TGCTCTTCAT CCTTGCGGTC GGCCTGGCGG TCACCATGGG GCTGATGAAC TTCATCAACC TGGCGCACGG CGCCTTTGCC ATGGCCGGCG GCTACATCAC GGTGCTGCTG ATGCAGCGCT TTGGCGTGCC GTTTTTGCTG TGCCTGCCGC TGGCCTTCAT CGGCTCGGCG CTGCTGGGCG GCGTGCTCGA ACGCACGCTG TACCGCCCGC TGTACCACAA GCCGCACCTG GACCAGGTGT TGTTTTCCAT TGGCCTGGTC TTCATGGCGG TGGCCAGCGT GGACTACTTC GTCGGCTCGA CGCAGCAGAT CATCCAGCTG CCCGAATGGC TCAAGGGCCG CACCGAACTG GGCAGCGGCG CCTGGATGCT GGGCATGGGG CACTACCGGC TGTTCATCAT TGCCGTGTGC GCGGCGCTGA CCGTGGGCTT GCAGTATGTG CTGGGCTACA CGCGCTTTGG CAGTCGGCTG CGCGCCTCGG TCGATGACCA GCGCGTTGCC GCCGGACTGG GCATCAATGT CAACATGGTG TTTCTCACGA CCTTCGCCGT GGGCTCGGGC CTGGCCGGCC TGGGCGGCGC GCTGGGCGCC GAGGTGCTGG GGCTGGACCC GAGCTTTCCG CTGAAGTTCA TGGTGTACTT TTTGATCGTC GTGGCCGTGG GCGGCACCTC GTCGATCACC GGGCCGCTGC TGGCCGCGCT GCTGCTGGGC ATTGCCGACG TGGCGGGCAA GTACTACATC CCCAAGCTGG GTGCCTTCAT CGTCTACAGC CTGATGATCG CCATTTTGAT CTGGCGCCCG CAAGGCCTCT TTGTGCGCAA GGGAGGCAAG TGA
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Protein sequence | MLTILFDGIA YGMLLFILAV GLAVTMGLMN FINLAHGAFA MAGGYITVLL MQRFGVPFLL CLPLAFIGSA LLGGVLERTL YRPLYHKPHL DQVLFSIGLV FMAVASVDYF VGSTQQIIQL PEWLKGRTEL GSGAWMLGMG HYRLFIIAVC AALTVGLQYV LGYTRFGSRL RASVDDQRVA AGLGINVNMV FLTTFAVGSG LAGLGGALGA EVLGLDPSFP LKFMVYFLIV VAVGGTSSIT GPLLAALLLG IADVAGKYYI PKLGAFIVYS LMIAILIWRP QGLFVRKGGK
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