Gene Pnap_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2724 
Symbol 
ID4688346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2870260 
End bp2871228 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID639835732 
Productferredoxin 
Protein accessionYP_982947 
Protein GI121605618 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.704562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0138338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA CCTCCACAAT CTCCGTGCGC GTCGCCCGCA AGCAGCGGGA AGCCGTGGAC 
ATCTGCACCT TCGAGCTGGT TGCCGAGGAG GGCGGACCGC TGCCCGCCTT TTCCGCCGGC
TCCCATGTGG ACGTGCATCT GCCCGGCGGC CTGACCCGCC AGTATTCGCT GTGCAATGAC
CCCACTGAAA GCCACCGCTA CCTGATCGGC GTGCTGCGCG ACCCGGCGTC GCGCGGCGGC
TCCCGGGCCA TGCATGACCA GGTCGCCGAA GGCCAAGTGC TGCAAATCAG CGCGCCCAAT
AACCACTTTC CGCTGGCGCA CGACGCCCAG CGCCACCTGC TGCTGGCCGG CGGCATCGGC
GTGACGCCCA TCCTGTGCAT GGCCGAGCGG CTGGCCAACA CCGGCGCCGA CTTCGAGATG
CACTACTGCA CCCGCTCACC CGAGCGCACC GCATTTCACC AGCGCATTGC CGGCTCCGGT
TTTGCGCCCA AAGTGCATTT CCACTTCGAC GATGGCGCGG CCGGCCAGAA GCTGGACATT
CCAGCGCTGC TGAGCACCCC GGCCAGCGGT GTGCATCTGT ATGTCTGCGG GCCGAAAGGC
TTCATGGATG CCGTGCTGAA CACGGCGCAG GCGCAAGGCT GGCCCGAGGC GCAACTGCAT
TACGAGTTCT TCGCCGGCAC GGTGGAAAAA TCCGACAGCG ACGCCAGCTT CGAGGTCCAG
CTGGCCAGCT CCGGCCGCAT CGTCATGGTG CCCAGCGACA AGACCGTGGT GCAGGCCCTG
GCCGATGCGG GCGTGGACGT GCAGGTGTCG TGCGAGCAAG GCGTGTGCGG CACCTGCCTG
ACCCGCGTGA TTGAAGGCAT CCCGGACCAC AAGGACATGT ACCTCACGCC CGAGGAACAA
GCCGCCAACG ACCAGTTCAC GCCGTGCTGC TCACGCGCCA AAACGCCGAG GCTGGTGCTG
GATTTGTGA
 
Protein sequence
MSMTSTISVR VARKQREAVD ICTFELVAEE GGPLPAFSAG SHVDVHLPGG LTRQYSLCND 
PTESHRYLIG VLRDPASRGG SRAMHDQVAE GQVLQISAPN NHFPLAHDAQ RHLLLAGGIG
VTPILCMAER LANTGADFEM HYCTRSPERT AFHQRIAGSG FAPKVHFHFD DGAAGQKLDI
PALLSTPASG VHLYVCGPKG FMDAVLNTAQ AQGWPEAQLH YEFFAGTVEK SDSDASFEVQ
LASSGRIVMV PSDKTVVQAL ADAGVDVQVS CEQGVCGTCL TRVIEGIPDH KDMYLTPEEQ
AANDQFTPCC SRAKTPRLVL DL